ArticleJournal of the Royal Society, Interface2010
A minimum of two distinct heritable factors are required to explain correlation structures in proliferating lymphocytes.
Article in Journal of the Royal Society, Interface, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- Modeling T Cell Fate.Annual review of immunology · 2023Review
- Counting generations in birth and death processes with competing Erlang and exponential waiting times.Scientific reports · 2022Article
- Cyton2: A Model of Immune Cell Population Dynamics That Includes Familial Instructional Inheritance.Frontiers in bioinformatics · 2021Article
- Hidden long-range memories of growth and cycle speed correlate cell cycles in lineage trees.eLife · 2020Article
- FAMoS: A Flexible and dynamic Algorithm for Model Selection to analyse complex systems dynamics.PLoS computational biology · 2019Article
- Stochastic Inheritance of Division and Death Times Determines the Size and Phenotype of CD8Frontiers in immunology · 2019Article
- Inferring average generation via division-linked labeling.Journal of mathematical biology · 2016Article
- Site-specific recombinatorics: in situ cellular barcoding with the Cre Lox system.BMC systems biology · 2016Article
- Quantifying intrinsic and extrinsic control of single-cell fates in cancer and stem/progenitor cell pedigrees with competing risks analysis.Scientific reports · 2016Article
- Mitogen-induced B-cell proliferation activates Chk2-dependent G1/S cell cycle arrest.PloS one · 2014Article
- Labour-efficient in vitro lymphocyte population tracking and fate prediction using automation and manual review.PloS one · 2014Article
- Quantifying T lymphocyte turnover.Journal of theoretical biology · 2013Article
- Understanding natural killer cell regulation by mathematical approaches.Frontiers in immunology · 2012Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
During the adaptive immune response, lymphocyte populations undergo a characteristic three-phase process: expansion through a series of cell divisions; cessation of expansion; and, finally, most of the accumulated lymphocytes die by apoptosis. The data used, thus far, to inform understanding of these processes, both in vitro and in vivo, are taken from flow cytometry experiments. One significant drawback of flow cytometry is that individual cells cannot be tracked, so that it is not possible to investigate interdependencies in the fate of cells within a family tree. This deficit in experimental information has recently been overcome by Hawkins et al. (Hawkins et al. 2009 Proc. Natl Acad. Sci. USA 106, 13 457-13 462 (doi:10.1073/pnas.0905629106)), who reported on time-lapse microscopy experiments in which B-cells were stimulated through the TLR-9 receptor. Cells stimulated in this way do not aggregate, so that data regarding family trees can be recorded. In this article, we further investigate the Hawkins et al. data. Our conclusions are striking: in order to explain the familial correlation structure in division times, death times and propensity to divide, a minimum of two distinct heritable factors are necessary. As the data show that two distinct factors are necessary, we develop a stochastic model that has two heritable factors and demonstrate that it can reproduce the key features of the data. This model shows that two heritable factors are sufficient. These deductions have a clear impact upon biological understanding of the adaptive immune response. They also necessitate changes to the fundamental premises behind the tools developed by statisticians to draw deductions from flow cytometry data. Finally, they affect the mathematical modelling paradigms that are used to study these systems, as these are widely developed based on assumptions of cellular independence that are not accurate.
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