Evidence map›Paper›PMID 20053306›Full record

ReviewGenome biology2009

The PIN-FORMED (PIN) protein family of auxin transporters.

Pavel Krecek, Petr Skupa, Jirí Libus, Satoshi Naramoto, Ricardo Tejos, Jirí Friml, Eva Zazímalová

Open access · bronzeAbstract readReview
In one paragraph

Review in Genome biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 220 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
220citing papers in PubMed, 1 pooled it
16.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

220 citing papers in PubMed, 1 synthesis or guideline pooled it, 511 citations in OpenAlex.

  1. Pooled it
  2. Different Dynamics:Biology · 2026
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  5. Reducing recalcitrance of black pepper toHorticulture research · 2026
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  12. ThePlants (Basel, Switzerland) · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Functional Analysis ofInternational journal of molecular sciences · 2024
    Article
  17. Identification of PotatoInternational journal of molecular sciences · 2024
    Article
  18. Article
  19. Article
  20. Article

160 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Pavel KrecekInstitute of Experimental Botany AS CR, Rozvojová 263, CZ-16502 Prague 6, Czech Republic.
Petr Skupa
Jirí Libus
Satoshi Naramoto
Ricardo Tejos
Jirí Friml
Eva Zazímalová
Czech Academy of Sciences, Institute of Experimental Botany · CZVlaams Instituut voor Biotechnologie · BEGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The PIN-FORMED (PIN) proteins are secondary transporters acting in the efflux of the plant signal molecule auxin from cells. They are asymmetrically localized within cells and their polarity determines the directionality of intercellular auxin flow. PIN genes are found exclusively in the genomes of multicellular plants and play an important role in regulating asymmetric auxin distribution in multiple developmental processes, including embryogenesis, organogenesis, tissue differentiation and tropic responses. All PIN proteins have a similar structure with amino- and carboxy-terminal hydrophobic, membrane-spanning domains separated by a central hydrophilic domain. The structure of the hydrophobic domains is well conserved. The hydrophilic domain is more divergent and it determines eight groups within the protein family. The activity of PIN proteins is regulated at multiple levels, including transcription, protein stability, subcellular localization and transport activity. Different endogenous and environmental signals can modulate PIN activity and thus modulate auxin-distribution-dependent development. A large group of PIN proteins, including the most ancient members known from mosses, localize to the endoplasmic reticulum and they regulate the subcellular compartmentalization of auxin and thus auxin metabolism. Further work is needed to establish the physiological importance of this unexpected mode of auxin homeostasis regulation. Furthermore, the evolution of PIN-based transport, PIN protein structure and more detailed biochemical characterization of the transport function are important topics for further studies.

Indexed as

Evolution, MolecularModels, MolecularPhylogenyArabidopsisArabidopsis ProteinsGene Expression ProfilingIndoleacetic AcidsMembrane Transport ProteinsMultigene FamilyProtein ConformationArabidopsis ProteinsIndoleacetic AcidsMembrane Transport ProteinsPIN1 protein, Arabidopsis

Identifiers

PMID20053306
PMCPMC2812941
OpenAlexW2105062996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.