Evidence map›Paper›PMID 20049702›Full record

ArticleEMBO molecular medicine2009

The antibiotic ADEP reprogrammes ClpP, switching it from a regulated to an uncontrolled protease.

Janine Kirstein, Anja Hoffmann, Hauke Lilie, Ronny Schmidt, Helga Rübsamen-Waigmann, Heike Brötz-Oesterhelt, Axel Mogk, Kürşad Turgay

Abstract read
In one paragraph

Article in EMBO molecular medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Proteostasis-targeted antibacterial strategies.Journal of microbiology (Seoul, Korea) · 2026
    Review
  5. Article
  6. Development and evaluation of mitochondria-targeted caseinolytic protease (ClpP) agonist chemical probes in in vitro breast cancer models.Medicinal chemistry research : an international journal for rapid communications on design and mechanisms of action of biologically active agents · 2026
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Fighting Antimicrobial Resistance: Innovative Drugs in Antibacterial Research.Angewandte Chemie (International ed. in English) · 2025
    Review
  12. Article
  13. Article
  14. Bacterial persisters: molecular mechanisms and therapeutic development.Signal transduction and targeted therapy · 2024
    Review
  15. Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Janine KirsteinInstitut für Biologie-Mikrobiologie, FU Berlin, Berlin, Germany.
Anja Hoffmann
Hauke Lilie
Ronny Schmidt
Helga Rübsamen-Waigmann
Heike Brötz-Oesterhelt
Axel Mogk
Kürşad Turgay

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel class of antibiotic acyldepsipeptides (designated ADEPs) exerts its unique antibacterial activity by targeting the peptidase caseinolytic protease P (ClpP). ClpP forms proteolytic complexes with heat shock proteins (Hsp100) that select and process substrate proteins for ClpP-mediated degradation. Here, we analyse the molecular mechanism of ADEP action and demonstrate that ADEPs abrogate ClpP interaction with cooperating Hsp100 adenosine triphosphatases (ATPases). Consequently, ADEP treated bacteria are affected in ClpP-dependent general and regulatory proteolysis. At the same time, ADEPs also activate ClpP by converting it from a tightly regulated peptidase, which can only degrade short peptides, into a proteolytic machinery that recognizes and degrades unfolded polypeptides. In vivo nascent polypeptide chains represent the putative primary target of ADEP-activated ClpP, providing a rationale for the antibacterial activity of the ADEPs. Thus, ADEPs cause a complete functional reprogramming of the Clp-protease complex.

Indexed as

Anti-Bacterial AgentsBacillus subtilisCaseinsDepsipeptidesEndopeptidase ClpEnzyme ActivationEscherichia coliHeat-Shock ProteinsProtein BiosynthesisProtein FoldingProtein Processing, Post-TranslationalProtein Structure, QuaternaryAnti-Bacterial AgentsCaseinsDepsipeptidesEndopeptidase ClpHeat-Shock Proteins

Identifiers

PMID20049702
PMCPMC3378108

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.