ArticleBMC genomics2010
Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.
Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed, 65 citations in OpenAlex.
- Bacterial effectors mediate kinase reprogramming through mimicry of conserved eukaryotic motifs.EMBO reports · 2025Article
- Evidence of Greater Competitive Fitness of Erwinia amylovora over E. pyrifoliae in Korean Isolates.The plant pathology journal · 2022Article
- Spontaneous Resistance ofFrontiers in microbiology · 2022Article
- Virulence Genetics of an Erwinia amylovora Putative Polysaccharide Transporter Family Member.Journal of bacteriology · 2020Article
- Comparative Genome Analysis Reveals Natural Variations in the Genomes ofThe plant pathology journal · 2020Article
- Article
- Draft Genome Sequence ofGenome announcements · 2017Article
- Role of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host.BMC genomics · 2017Article
- Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen Erwinia Tracheiphila.Genome biology and evolution · 2016Article
- Recurrent evolution of gut symbiotic bacteria in pentatomid stinkbugs.Zoological letters · 2016Article
- Draft Genomes, Phylogenetic Reconstruction, and Comparative Genomics of Two Novel Cohabiting Bacterial Symbionts Isolated from Frankliniella occidentalis.Genome biology and evolution · 2015Article
- Genetic islands in pome fruit pathogenic and non-pathogenic Erwinia species and related plasmids.Frontiers in microbiology · 2015Review
- Commonalities and differences of T3SSs in rhizobia and plant pathogenic bacteria.Frontiers in plant science · 2014Review
- Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved core.PloS one · 2013Article
- Comparative genome analysis of Enterobacter cloacae.PloS one · 2013Article
- PathogenFinder--distinguishing friend from foe using bacterial whole genome sequence data.PloS one · 2013Article
- Genome sequence of Pectobacterium carotovorum subsp. carotovorum strain PCC21, a pathogen causing soft rot in Chinese cabbage.Journal of bacteriology · 2012Article
- Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.Molecular plant pathology · 2012Article
- Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.Sensors (Basel, Switzerland) · 2012Review
- Erwinia amylovora CRISPR elements provide new tools for evaluating strain diversity and for microbial source tracking.PloS one · 2012Article
Corrections and comments
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Authors and funding
7 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundErwinia pyrifoliae is a newly described necrotrophic pathogen, which causes fire blight on Asian (Nashi) pear and is geographically restricted to Eastern Asia. Relatively little is known about its genetics compared to the closely related main fire blight pathogen E. amylovora.
resultsThe genome of the type strain of E. pyrifoliae strain DSM 12163T, was sequenced using both 454 and Solexa pyrosequencing and annotated. The genome contains a circular chromosome of 4.026 Mb and four small plasmids. Based on their respective role in virulence in E. amylovora or related organisms, we identified several putative virulence factors, including type III and type VI secretion systems and their effectors, flagellar genes, sorbitol metabolism, iron uptake determinants, and quorum-sensing components. A deletion in the rpoS gene covering the most conserved region of the protein was identified which may contribute to the difference in virulence/host-range compared to E. amylovora. Comparative genomics with the pome fruit epiphyte Erwinia tasmaniensis Et1/99 showed that both species are overall highly similar, although specific differences were identified, for example the presence of some phage gene-containing regions and a high number of putative genomic islands containing transposases in the E. pyrifoliae DSM 12163T genome.
conclusionsThe E. pyrifoliae genome is an important addition to the published genome of E. tasmaniensis and the unfinished genome of E. amylovora providing a foundation for re-sequencing additional strains that may shed light on the evolution of the host-range and virulence/pathogenicity of this important group of plant-associated bacteria.
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