Evidence map›Paper›PMID 20043209›Full record

ArticleDigestive diseases and sciences2010

Clinical significance of genotypes and precore/basal core promoter mutations in HBV related chronic liver disease patients in North India.

Sanjeev Sharma, Balkrishan Sharma, Bhupesh Singla, Yogesh Kumar Chawla, Anuradha Chakraborti, Nitin Saini, Ajay Duseja, Ashim Das, Radha Krishan Dhiman

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Article in Digestive diseases and sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Current Scenario of Hepatitis B and Its Treatment in India.Journal of clinical and translational hepatology · 2017
    Review
  9. Review
  10. Hepatitis B virus genotypes and variants.Cold Spring Harbor perspectives in medicine · 2015
    Review
  11. Review
  12. Article
  13. Hepatitis B virus genotyping: is the time ripe for routine clinical use?Journal of clinical and experimental hepatology · 2012
    Article
  14. Is there any value to hepatitis B virus genotype analysis?Current gastroenterology reports · 2012
    Review
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Sanjeev SharmaDepartment of Hepatology, Postgraduate Institute of Medical Education and Research, Chandigarh, India.
Balkrishan Sharma
Bhupesh Singla
Yogesh Kumar Chawla
Anuradha Chakraborti
Nitin Saini
Ajay Duseja
Ashim Das
Radha Krishan Dhiman
Post Graduate Institute of Medical Education and Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeData on genotypes, basal core promoter (BCP) and precore mutants of hepatitis B virus and their association with different HBV related liver disease have been studied inadequately and are controversial. Thus, the aim of this study was to determine the incidence of BCP and precore HBV mutants and their relationship with HBV genotype and different stages of HBV related liver disease in North Indian patients.

methodsA total 273 patients with different stages of HBV related liver diseases were enrolled. Nested polymerase chain reaction (PCR) was used to amplify the BCP/PC regions. RFLP and direct sequencing were performed to validate the mutations identified in these regions. HBV genotyping was accomplished by multiplex PCR.

resultsGenotype D was the predominant genotype found in each of the various HBV related liver diseases. The BCP mutation was found significantly more often in inactive carriers and compensated cirrhosis as compared to the other groups. The BCP mutation was present in 29.1% of patients with genotype D versus 17.1% with genotype A (P = 0.001). The precore mutation was also more frequently observed with genotype D compared with genotype A (36.9 vs. 4.8%, P = 0.0007).

conclusionGenotype D is predominant in North Indian patients. The BCP and precore mutations occur in one-third of HBV positive patients in association with the genotype D. We did not find any correlation with severity of liver disease with genotypes and mutations.

Indexed as

Acute DiseaseAdultBase SequenceFemaleGenotypeHepatitis B, ChronicHepatitis B virusHumansIndiaMaleMiddle AgedMutationPolymorphism, Restriction Fragment LengthPromoter Regions, Genetic

Identifiers

PMID20043209
OpenAlexW2070606315

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.