Evidence map›Paper›PMID 20042209›Full record

ArticleVirology2010

Accelerated evolution of SIV env within the cerebral compartment in the setting of morphine-dependent rapid disease progression.

Vanessa Rivera-Amill, Richard J Noel, Yashira García, Ivelisse Rivera, Marcus Iszard, Shilpa Buch, Anil Kumar

Open access · greenAbstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Opioid and neuroHIV Comorbidity - Current and Future Perspectives.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2020
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Vanessa Rivera-AmillDepartment of Microbiology, Ponce School of Medicine, Ponce, Puerto Rico 00732-7004. vrivera@psm.edu
Richard J Noel
Yashira García
Ivelisse Rivera
Marcus Iszard
Shilpa Buch
Anil Kumar
Ponce Health Sciences University · PRUniversity of Missouri–Kansas City · USUniversity of Nebraska Medical Center · US

Funding

VIRAL SEQUENCES IN PEDIATRIC HIV INFECTION IN PRG12RR003050 · NCRR · PONCE SCHOOL OF MEDICINE · PI ARMSTRONG, RAUL A · 1985 to 2011
$28.1M
Efffects of opiate virus/host response in SHIV/macaqueR01DA015013 · NIDA · UNIVERSITY OF MISSOURI KANSAS CITY · PI KUMAR, ANIL · 2001 to 2011
$3.1M
Methamphetamine and AIDS in a Non-Human Primate ModelR01DA025011 · NIDA · UNIVERSITY OF MISSOURI KANSAS CITY · PI KUMAR, ANIL · 2008 to 2014
$1.8M
NCRR NIH HHS G12 RR003050NCRR NIH HHS RR003050NIDA NIH HHS DA015013NIDA NIH HHS DA025011NIDA NIH HHS R01 DA015013NIDA NIH HHS R01 DA025011
6 · The paper itself

Abstract

Human immunodeficiency virus-1 (HIV-1) and simian immunodeficiency virus (SIV) have been shown to compartmentalize within various tissues, including the brain. However, the evolution of viral quasispecies in the setting of drug abuse has not been characterized. The goal of this study was to examine viral evolution in the cerebral compartment of morphine-dependent and control macaques to determine its role in rapid disease progression. To address this issue, we analyzed the envelope (env) gene from proviral DNA in our SIV/SHIV macaque model of morphine dependence and AIDS. Analyses of proviral DNA revealed a direct correlation between total genetic changes and survival time. However, the rate of evolution during disease progression was higher in morphine-dependent and rapid-progressor macaques than was the rate of evolution in the control animals. This study provides additional insight into SIV envelope variation in the CNS of morphine-dependent macaques and genotypes that may have evolved in the brain and contributed to disease progression.

Indexed as

Disease ProgressionAnimalsBrainBrain ChemistryEvolution, MolecularGene Products, envGenotypeMacacaMolecular Sequence DataMorphine DependencePhenotypeSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusGene Products, env

Identifiers

PMID20042209
PMCPMC2828616
OpenAlexW2031541061

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.