Evidence map›Paper›PMID 20041285›Full record

ArticlePlanta2010

SPA1 and DET1 act together to control photomorphogenesis throughout plant development.

Markus Nixdorf, Ute Hoecker

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Markus NixdorfBotanical Institute, University of Cologne, Otto-Fischer-Str. 6, 50674, Cologne, Germany.
Ute Hoecker
University of Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The COP1/SPA complex and DET1 function to suppress photomorphogenesis in dark-grown Arabidopsis seedlings. Additionally, they inhibit flowering under non-inductive short-day conditions. The COP1/SPA complex and DET1, as part of the CDD complex, represent distinct high-molecular-weight complexes in Arabidopsis. Here, we provide genetic evidence that these complexes co-act in regulating plant development. We report the isolation of a spa1 enhancer mutation that represents a novel, very weak allele of det1. This det1 ( esp1 ) mutation caused no detectable mutant phenotype in the presence of wild-type SPA1, but showed strongly synergistic genetic interaction with the spa1 mutation in the control of seedling photomorphogenesis, anthocyanin accumulation, plant size as well as flowering time. On the biochemical level, the det1 ( esp1 ) spa1 double mutant showed higher HY5 protein levels than either single mutant or the wild type. The genetic interaction of spa1 and det1 mutations was further confirmed in the spa1 det1-1 double mutant which carries a strong allele of det1. Taken together, these results show that SPA1 and DET1 act together to control photomorphogenesis throughout plant development. Hence, this suggests that COP1/SPA complexes and the CDD complex co-act in controlling the protein stability of COP1/SPA target proteins.

Indexed as

ArabidopsisArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCell Cycle ProteinsGene Expression Regulation, PlantIntracellular Signaling Peptides and ProteinsLightNuclear ProteinsPlants, Genetically ModifiedPolymerase Chain ReactionSeedlingsArabidopsis ProteinsBasic-Leucine Zipper Transcription FactorsCell Cycle ProteinsDET1 protein, ArabidopsisHY5 protein, ArabidopsisIntracellular Signaling Peptides and ProteinsNuclear ProteinsSPA1 protein, Arabidopsis

Identifiers

PMID20041285
OpenAlexW2022306948

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.