Evidence map›Paper›PMID 20038640›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2010

Defective ribosomal products are the major source of antigenic peptides endogenously generated from influenza A virus neuraminidase.

Brian P Dolan, Lily Li, Kazuyo Takeda, Jack R Bennink, Jonathan W Yewdell

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Neuraminidase delivered as an APC-targeted DNA vaccine induces protective antibodies against influenza.Molecular therapy : the journal of the American Society of Gene Therapy · 2023
    Article
  3. Review
  4. Review
  5. Surprisingly Effective Priming of CD8Journal of virology · 2020
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Influenza A Virus Negative Strand RNA Is Translated for CD8Journal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian P DolanLaboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Lily Li
Kazuyo Takeda
Jack R Bennink
Jonathan W Yewdell
National Institutes of Health · US

Funding

Delivery Of Antigens To The MHC Class I Processing PathwayZIAAI000653 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI YEWDELL, JONATHAN W · 2009 to 2015
$2.8M
DELIVERY OF ANTIGENS TO THE MHC CLASS PROCESSING PATHWAYZ01AI000653 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI YEWDELL, JONATHAN W · 1992 to 2008
$1.6M
Intramural NIH HHS Z01 AI000653
6 · The paper itself

Abstract

The defective ribosomal product (DRiP) hypothesis of endogenous Ag processing posits that rapidly degraded forms of nascent proteins are a major source of peptide ligands for MHC class I molecules. Although there is broad experimental support for the DRiP hypothesis, careful kinetic analysis of the generation of defined peptide class I complexes has been limited to studies of recombinant vaccinia viruses expressing genes derived from other organisms. In this study, we show that insertion of the SIINFEKL peptide into the stalk of influenza A virus neuraminidase (NA) does not detectably modify NA folding, degradation, transport, or sp. act. when expressed in its natural context of influenza A virus infection. Using the 25-D1.16 mAb specific for K(b)-SIINFEKL to precisely quantitate cell surface complexes by flow cytometry, we demonstrate that SIINFEKL is generated in complete lockstep with initiation and abrogation of NA biosynthesis in both L-K(b) fibroblast cells and DC2.4 dendritic/monocyte cells. SIINFEKL presentation requires active proteasomes and TAP, consistent with its generation from a cytosolic DRiP pool. From the difference in the shutoff kinetics of K(b)-SIINFEKL complex expression following protein synthesis versus proteasome inhibition, we estimate that the t(1/2) of the biosynthetic source of NA peptide is approximately 5 min. These observations extend the relevance of the DRiP hypothesis to viral proteins generated in their natural context.

Indexed as

Amino Acid SequenceAnimalsAntigen PresentationAntigens, ViralCell LineDendritic CellsDogsEnzyme ActivationEnzyme StabilityEpitopesFibroblastsH-2 AntigensInfluenza A Virus, H1N1 SubtypeL CellsMiceMolecular Sequence DataAntigens, ViralEpitopesH-2 AntigensH-2Kb protein, mouseNeuraminidaseOVA-8OvalbuminPeptide FragmentsRibosomal Proteins

Identifiers

PMID20038640
PMCPMC2940057
OpenAlexW1913018482

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.