Evidence map›Paper›PMID 20037791›Full record

ArticleCancer causes & control : CCC2010

Genes involved with folate uptake and distribution and their association with colorectal cancer risk.

Jane C Figueiredo, A Joan Levine, Won H Lee, David V Conti, Jenny N Poynter, Peter T Campbell, David Duggan, Juan Pablo Lewinger, Maria Elena Martinez, Cornelia M Ulrich and 8 more

Open access · greenAbstract read
In one paragraph

Article in Cancer causes & control : CCC, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Potential value of nutrigenomics in Crohn's disease.Nature reviews. Gastroenterology & hepatology · 2012
    Review
  12. Review
  13. Article
  14. Article
  15. SLC19A1 pharmacogenomics summary.Pharmacogenetics and genomics · 2010
    Article
  16. Use of folic acid-containing supplements after a diagnosis of colorectal cancer in the Colon Cancer Family Registry.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2010
    Article
  17. A candidate gene study of folate-associated one carbon metabolism genes and colorectal cancer risk.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 9 institutions in 3 countries.

Jane C FigueiredoDepartment of Preventive Medicine, Keck School of Medicine, University of Southern California, 1450 Biggy Street Room 1509J, Los Angeles, CA 90033, USA. janefigu@usc.edu
A Joan Levine
Won H Lee
David V Conti
Jenny N Poynter
Peter T Campbell
David Duggan
Juan Pablo Lewinger
Maria Elena Martinez
Cornelia M Ulrich
Polly Newcomb
John Potter
Paul J Limburg
John Hopper
Mark A Jenkins
Loic Le Marchand
John A Baron
Robert W Haile
University of Southern California · USFred Hutch Cancer Center · USUniversity of Melbourne · AUCancer Research Center · USDartmouth Hospital · GBMayo Clinic in Arizona · USSouthern California University for Professional Studies · USTranslational Genomics Research Institute · USUniversity of Arizona · US

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Dan Theodorescu · 1985 to 2026
$110.2M
WHEAT BRAN FIBER SUPPLEMENTS ON THE RECURRENCE OF COLONIC ADENOMASP01CA041108 · NCI · UNIVERSITY OF ARIZONA · PI LANCE, M. PETER · 1986 to 2009
$38.8M
SPORE in Gastrointestinal CancerP50CA095060 · NCI · UNIVERSITY OF ARIZONA · PI GERNER, EUGENE W · 2002 to 2012
$25.3M
USC Consortium:Colorectal Cancer Family RegistryU01CA074799 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAILE, ROBERT WILLIAM · 1997 to 2008
$20.4M
SEATTLE FAMILIAL COLORECTAL CANCER REGISTRYU01CA074794 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NEWCOMB, POLLY A · 1997 to 2007
$14.1M
ONTARIO REGISTRY FOR STUDIES OF FAMILIAL COLON CANCERU01CA074783 · NCI · CANCER CARE ONTARIO · PI GALLINGER, STEVEN · 1997 to 2008
$12.5M
FAMILIAL COLORECTAL NEOPLASIA COLLABORATIVE GROUPU01CA074800 · NCI · MAYO CLINIC ROCHESTER · PI LINDOR, NORALANE MOREY · 1997 to 2007
$9.1M
The Colon Cancer Family Registry: USC ConsortiumU24CA074799 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAILE, ROBERT WILLIAM · 2008 to 2011
$7.6M
AUSTRALASIAN COLORECTAL CANCER FAMILY REGISTRYU01CA097735 · NCI · UNIVERSITY OF MELBOURNE · PI HOPPER, JOHN L · 2002 to 2007
$6.9M
UCLA CANCER EPIDEMIOLOGY TRAINING PROGRAMT32CA009142 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHANG, ZUO-FENG · 1986 to 2024
$6.3M
HAWAII FAMILY REGISTRY OF COLON CANCERU01CA074806 · NCI · UNIVERSITY OF HAWAII AT MANOA · PI LE MARCHAND, LOIC · 1997 to 2008
$6.1M
Folate, Vitamin D and Calcium in Colorectal CancerR01CA112237 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HAILE, ROBERT WILLIAM · 2005 to 2009
$2.3M
NCI NIH HHS CA23074NCI NIH HHS CA-95-011NCI NIH HHS CA95060NCI NIH HHS P01 CA041108NCI NIH HHS P01 CA41108NCI NIH HHS P30 CA023074NCI NIH HHS P50 CA095060NCI NIH HHS R01 CA112237NCI NIH HHS T32 CA009142NCI NIH HHS U01 CA074783NCI NIH HHS U01 CA074794NCI NIH HHS U01 CA074799NCI NIH HHS U01 CA074800NCI NIH HHS U01 CA074806NCI NIH HHS U01 CA097735NCI NIH HHS U24 CA074799
6 · The paper itself

Abstract

Folate status is an important predictor of colorectal cancer risk. Common genetic variants in genes involved in regulating cellular folate levels might also predict risk, but there are limited data on this issue. We conducted a family-based case-control association study of variants in four genes involved in folate uptake and distribution: FOLR1, FPGS, GGH and SLC19A1, using 1,750 population-based and 245 clinic-based cases of pathologically confirmed colorectal cancer and their unaffected relatives participating in the Colon Cancer Family Registries. Standardized questionnaires, administered to all participants, collected information on risk factors and diet. Standard molecular techniques were used to determine microsatellite instability (MSI) status on cases. tagSNPs (n = 29) were selected based on coverage as assessed by pairwise r2. We found no evidence that tagSNPs in these genes were associated with risk of colorectal cancer. For the SLC19A1-rs1051266 (G80A, Arg27His) missense polymorphism, the A/A genotype was not associated with risk of colorectal cancer using population-based (OR = 1.00; 95% CI = 0.81-1.23) or clinic-based (OR = 0.75; 95% CI = 0.44-1.29) families compared to the G/A and G/G genotypes. We found no evidence that the association between any tagSNP and CRC risk was modified by multivitamin use, folic acid use and dietary folate intake and total folate intake. The odds ratios were similar, irrespective of MSI status, tumor subsite and family history of colorectal cancer. In conclusion, we found no significant evidence that genetic variants in FOLR1, GGH, FPGS and SLC19A1 are associated with the risk of colorectal cancer.

Indexed as

Polymorphism, Single NucleotideAdultAgedCarrier ProteinsCase-Control StudiesColorectal NeoplasmsFamily HealthFemaleFolate Receptor 1Folate Receptors, GPI-AnchoredFolic Acidgamma-Glutamyl HydrolaseGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansCarrier ProteinsFolate Receptor 1Folate Receptors, GPI-AnchoredFolic AcidFOLR1 protein, humanfolylpolyglutamate synthetasegamma-Glutamyl HydrolaseMembrane Transport ProteinsPeptide SynthasesReceptors, Cell SurfaceReduced Folate Carrier ProteinSLC19A1 protein, humancase-controlclinic-basedcolorectal cancerfamily-basedFolatefolate receptor 1 (FOLR1)folylpolyglutamate synthase (FPGS)gamma-glutamyl hydrolase (GGH)polymorphismspopulation-basedreduced folate carrier (RFC)solute carrier family 19 (SLC19A1)

Identifiers

PMID20037791
PMCPMC2904058
OpenAlexW2020319740

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.