Evidence map›Paper›PMID 20037581›Full record

ArticleNature biotechnology2010

Design of phosphodiesterase 4D (PDE4D) allosteric modulators for enhancing cognition with improved safety.

Alex B Burgin, Olafur T Magnusson, Jasbir Singh, Pam Witte, Bart L Staker, Jon M Bjornsson, Margret Thorsteinsdottir, Sigrun Hrafnsdottir, Timothy Hagen, Alex S Kiselyov and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature biotechnology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 392 citations in OpenAlex.

  1. Trial
  2. Peel of Pomegranate Fruit (Current issues in molecular biology · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. 3D-QSAR Studies on High-affinity Phosphodiestera.Current medicinal chemistry · 2025
    Article
  13. Phosphodiesterases: Evolving Concepts and Implications for Human Therapeutics.Annual review of pharmacology and toxicology · 2025
    Review
  14. PDE4D: A Multipurpose Pharmacological Target.International journal of molecular sciences · 2024
    Review
  15. Review
  16. Article
  17. Robust Quantification of Phosphodiesterase-4D in Monkey Brain with PET andJournal of nuclear medicine : official publication, Society of Nuclear Medicine · 2024
    Article
  18. Article
  19. Article
  20. Review

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Alex B BurgindeCODE biostructures, Bainbridge Island, Washington, USA. aburgin@embios.com
Olafur T Magnusson
Jasbir Singh
Pam Witte
Bart L Staker
Jon M Bjornsson
Margret Thorsteinsdottir
Sigrun Hrafnsdottir
Timothy Hagen
Alex S Kiselyov
Lance J Stewart
Mark E Gurney
deCODE Genetics (Iceland) · ISVirginia Mason Bainbridge Island Medical Center · US

Funding

Sub-project 5U54GM074961 · NIGMS · EMERALD BIOSTRUCTURES · PI KUHN, PETER · 2005 to 2009
$19.3M
NIGMS NIH HHS U54 GM074961
6 · The paper itself

Abstract

Phosphodiesterase 4 (PDE4), the primary cAMP-hydrolyzing enzyme in cells, is a promising drug target for a wide range of conditions. Here we present seven co-crystal structures of PDE4 and bound inhibitors that show the regulatory domain closed across the active site, thereby revealing the structural basis of PDE4 regulation. This structural insight, together with supporting mutagenesis and kinetic studies, allowed us to design small-molecule allosteric modulators of PDE4D that do not completely inhibit enzymatic activity (I(max) approximately 80-90%). These allosteric modulators have reduced potential to cause emesis, a dose-limiting side effect of existing active site-directed PDE4 inhibitors, while maintaining biological activity in cellular and in vivo models. Our results may facilitate the design of CNS therapeutics modulating cAMP signaling for the treatment of Alzheimer's disease, Huntington's disease, schizophrenia and depression, where brain distribution is desired for therapeutic benefit.

Indexed as

Drug DesignPhosphodiesterase 4 InhibitorsAllosteric RegulationAmino Acid SequenceAnimalsBehavior, AnimalBenzhydryl CompoundsBiological AssayCatalytic DomainCell LineCognitionCrystallography, X-RayCyclic Nucleotide Phosphodiesterases, Type 4Disease Models, AnimalHumansKineticsBenzhydryl CompoundsCyclic Nucleotide Phosphodiesterases, Type 4D159687Phenylurea CompoundsPhosphodiesterase 4 InhibitorsPhosphodiesterase Inhibitors

Identifiers

PMID20037581
OpenAlexW1997277329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.