Evidence map›Paper›PMID 20037156›Full record

ArticleThe Journal of biological chemistry2010

Tryptophan in the pore of the mechanosensitive channel MscS: assessment of pore conformations by fluorescence spectroscopy.

Tim Rasmussen, Michelle D Edwards, Susan S Black, Akiko Rasmussen, Samantha Miller, Ian R Booth

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Mechanosensitive channel gating by delipidation.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Article
  5. Article
  6. Article
  7. The role of lipids in mechanosensation.Nature structural & molecular biology · 2015
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Tim RasmussenSchool of Medical Sciences, University of Aberdeen, Aberdeen AB25 2ZD, Scotland, United Kingdom. t.rasmussen@abdn.ac.uk
Michelle D Edwards
Susan S Black
Akiko Rasmussen
Samantha Miller
Ian R Booth
University of Aberdeen · GB

Funding

Medical Research Council G0400277Wellcome TrustWellcome Trust 040174Wellcome Trust 086903
6 · The paper itself

Abstract

Structural changes in channel proteins give critical insights required for understanding the gating transitions that underpin function. Tryptophan (Trp) is uniquely sensitive to its environment and can be used as a reporter of conformational changes. Here, we have used site-directed Trp insertion within the pore helices of the small mechanosensitive channel protein, MscS, to monitor conformational transitions. We show that Trp can be inserted in place of Leu at the two pore seal positions, Leu(105) and Leu(109), resulting in functional channels. Using Trp(105) as a probe, we demonstrate that the A106V mutation causes a modified conformation in the purified channel protein consistent with a more open state in solution. Moreover, we show that solubilized MscS changes to a more open conformation in the presence of phospholipids or their lysoforms.

Indexed as

Escherichia coliEscherichia coli ProteinsIon Channel GatingIon ChannelsMutation, MissensePhospholipidsProtein Structure, SecondarySpectrometry, FluorescenceTryptophanEscherichia coli ProteinsIon ChannelsMscS protein, E coliPhospholipidsTryptophan

Identifiers

PMID20037156
PMCPMC2820766
OpenAlexW1967820170

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.