Evidence map›Paper›PMID 20034085›Full record

ArticleAmerican journal of medical genetics. Part A2010

A de novo 8.8-Mb deletion of 21q21.1-q21.3 in an autistic male with a complex rearrangement involving chromosomes 6, 10, and 21.

Chad R Haldeman-Englert, Kimberly A Chapman, Hillary Kruger, Elizabeth A Geiger, Donna M McDonald-McGinn, Eric Rappaport, Elaine H Zackai, Nancy B Spinner, Tamim H Shaikh

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
0.6field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Psychiatric Disorders and Distal 21q Deletion-A Case Report.International journal of environmental research and public health · 2020
    Article
  7. Article
  8. A gain-of-function mutation in theNeurology. Genetics · 2017
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Pharmacogenetics of new analgesics.British journal of pharmacology · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Chad R Haldeman-EnglertDivision of Human Genetics, The Children's Hospital of Philadelphia, 1002 ARC, 3615 Civic Center Blvd., Philadelphia, PA 19104, USA.
Kimberly A Chapman
Hillary Kruger
Elizabeth A Geiger
Donna M McDonald-McGinn
Eric Rappaport
Elaine H Zackai
Nancy B Spinner
Tamim H Shaikh
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

MEDICAL GENETICS RESEARCH TRAINING GRANTT32GM008638 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Rebecca Ganetzky · 1997 to 2026
$8.7M
Copy Number Alterations in Genomic DisordersR01GM081519 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI SHAIKH, TAMIM H · 2007 to 2010
$2.4M
NIGMS NIH HHS 5-T32-GM-008638-11NIGMS NIH HHS GM081519NIGMS NIH HHS R01 GM081519NIGMS NIH HHS T32 GM008638
6 · The paper itself

Abstract

We report here on a normal-appearing male with pervasive developmental disorder who was found to have a de novo, apparently balanced complex rearrangement involving chromosomes 6, 10, and 21: 46,XY,ins(21;10)(q11.2;p11.2p13)t(6;21)(p23;q11.2). Further analysis by high-density oligonucleotide microarray was performed, showing an 8.8-Mb heterozygous deletion at 21q21.1-q21.3. Interestingly, the deletion is distal to the translocation breakpoint on chromosome 21. The deletion involves 19 genes, including NCAM2 and GRIK1, both of which are associated with normal brain development and function, and have been considered as possible candidate genes in autism and other neurobehavioral disorders. This case underscores the utility of genomewide microarray analysis for the detection of copy number alterations in patients with apparently balanced complex rearrangements and abnormal phenotypes.

Indexed as

Chromosome DeletionChromosomes, Human, Pair 10Chromosomes, Human, Pair 21Chromosomes, Human, Pair 6Autistic DisorderChildHumansIn Situ Hybridization, FluorescenceMaleOligonucleotide Array Sequence Analysis

Identifiers

PMID20034085
PMCPMC2801886
OpenAlexW2051196937

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.