Evidence map›Paper›PMID 20032079›Full record

ArticlePlant physiology2010

Expression quantitative trait loci analysis of two genes encoding rubisco activase in soybean.

Zhitong Yin, Fanfan Meng, Haina Song, Xiaolin Wang, Xiaoming Xu, Deyue Yu

Abstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Species-wide inventory ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Overexpression ofGenes · 2022
    Article
  10. Genetics as a key to improving crop photosynthesis.Journal of experimental botany · 2022
    Article
  11. Review
  12. Article
  13. AFrontiers in plant science · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Evolution of Rubisco activase gene in plants.Plant molecular biology · 2018
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zhitong YinNational Center for Soybean Improvement, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.
Fanfan Meng
Haina Song
Xiaolin Wang
Xiaoming Xu
Deyue Yu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rubisco activase (RCA) catalyzes the activation of Rubisco in vivo and plays a crucial role in photosynthesis. However, until now, little was known about the molecular genetics of RCA in soybean (Glycine max), one of the most important legume crops. Here, we cloned and characterized two genes encoding the longer alpha -isoform and the shorter beta -isoform of soybean RCA (GmRCA alpha and GmRCA beta, respectively). The two corresponding cDNAs are divergent in both the translated and 3 ' untranslated regions. Analysis of genomic DNA sequences suggested that the corresponding mRNAs are transcripts of two different genes and not the products of a single alternatively splicing pre-mRNA. Two additional possible alpha -form RCA-encoding genes, GmRCA03 and GmRCA14, and one additional beta -form RCA-encoding gene, GmRCA11, were also isolated. To examine the function and modulation of RCA genes in soybean, we determined the expression levels of GmRCA alpha and GmRCA beta, Rubisco initial activity, photosynthetic rate, and seed yield in 184 soybean recombinant inbred lines. Correlation of gene expression levels with three other traits indicates that RCA genes could play an important role in regulating soybean photosynthetic capacity and seed yield. Expression quantitative trait loci mapping revealed four trans-expression quantitative trait loci for GmRCA alpha and GmRCA beta. These results could provide a new approach for the modulation of RCA genes to improve photosynthetic rate and plant growth in soybean and other plants.

Indexed as

Quantitative Trait LociAmino Acid SequenceBase SequenceChromosome MappingCloning, MolecularDNA, ComplementaryDNA, PlantEnzyme ActivationGene Expression Regulation, PlantGenes, PlantGlycine maxIsoenzymesMolecular ChaperonesMolecular Sequence DataPhotosynthesisPhylogenyDNA, ComplementaryDNA, PlantIsoenzymesMolecular ChaperonesPlant Proteinsrca protein, plantRecombinant Proteins

Identifiers

PMID20032079
PMCPMC2832260

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.