Evidence map›Paper›PMID 20031218›Full record

ArticleMolecular immunology2010

Channel catfish soluble FcmuR binds conserved linear epitopes present on Cmu3 and Cmu4.

Deepak K Nayak, Aihua Tang, Melanie Wilson, Norman W Miller, Eva Bengtén

Abstract read
In one paragraph

Article in Molecular immunology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Functional Characterization of Largemouth Bass (International journal of molecular sciences · 2022
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Deepak K NayakDepartment of Microbiology, University of Mississippi Medical Center, Jackson, MS 39216, USA.
Aihua Tang
Melanie Wilson
Norman W Miller
Eva Bengtén

Funding

Immunologic Studies in Ectothermin VertebratesR01AI019530 · NIAID · UNIVERSITY OF MISSISSIPPI MEDICAL CENTER · PI MILLER, NORMAN W. · 1985 to 2006
$1.9M
NIAID NIH HHS R01 AI019530NIAID NIH HHS R01AI-19530
6 · The paper itself

Abstract

A linear epitope on catfish IgM has been identified as the docking site for the catfish soluble FcmuR (IpFcRI). Western blot analyses and latex bead binding assays identified the consensus octapeptide motif FxCxVxHE located at the second cysteine that forms the intrachain disulfide bond of the catfish Cmu3 and Cmu4 immunolglobulin (Ig) domains as the IpFcRI binding sites. Furthermore, molecular modeling of catfish Cmu3 and Cmu4 confirmed that the octapeptide in both of these domains is accessible for IpFcRI interactions. In addition, since this octapeptide motif is also found in other vertebrate Ig domains, IpFcRI binding to Ig heavy (H) and light (L) chains from rainbow trout, chicken, mouse, rabbit, and goat were examined by Western blot analyses and latex bead binding assays. IpFcRI readily bound reduced rainbow trout (Igmu), chicken (Ignu), mouse (Igmu, Iggamma1, Iggamma2a, Iggamma2b, and Igalpha), rabbit (Igmu and Iggamma) and goat (Iggamma) IgH chains, and mouse Igkappa and Iglambda, and chicken Iglambda IgL chains. IpFcRI also bound mouse IgM, IgA and IgG subclasses when examined under native conditions.

Indexed as

Conserved SequenceAmino Acid SequenceAnimalsEpitopesIctaluridaeImmunoglobulin Constant RegionsImmunoglobulin MMiceModels, MolecularMolecular Sequence DataOxidation-ReductionProtein BindingProtein Structure, TertiaryReceptors, FcSolubilitySpecies SpecificityEpitopesImmunoglobulin Constant RegionsImmunoglobulin MReceptors, Fc

Identifiers

PMID20031218
PMCPMC2830281

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.