Evidence map›Paper›PMID 20023172›Full record

ArticleDevelopment (Cambridge, England)2010

Distinguishing direct from indirect roles for bicoid mRNA localization factors.

Timothy T Weil, Despina Xanthakis, Richard Parton, Ian Dobbie, Catherine Rabouille, Elizabeth R Gavis, Ilan Davis

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. eLife · 2016
    Article
  6. Review
  7. Article
  8. Review
  9. Subcellular mRNA localisation at a glance.Journal of cell science · 2014
    Review
  10. Review
  11. Article
  12. mRNA localization and translational control in Drosophila oogenesis.Cold Spring Harbor perspectives in biology · 2012
    Review
  13. Control of cytoplasmic mRNA localization.Cellular and molecular life sciences : CMLS · 2012
    Review
  14. Article
  15. Review
  16. Article
  17. Molecular motors: directing traffic during RNA localization.Critical reviews in biochemistry and molecular biology · 2011
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Timothy T WeilUMC Utrecht, Department of Cell Biology, Cell Microscopy Centre, AZU H02.313, Heildelberglaan 100, 3584 CX, Utrecht, The Netherlands.
Despina Xanthakis
Richard Parton
Ian Dobbie
Catherine Rabouille
Elizabeth R Gavis
Ilan Davis
University of Oxford · GBPrinceton University · USUniversity Medical Center Utrecht · NL

Funding

Mechanism of RNA Localization in Drosophila DevelopmentR01GM067758 · NIGMS · PRINCETON UNIVERSITY · PI GAVIS, ELIZABETH R · 2004 to 2017
$5.3M
NIGMS NIH HHS GM067758NIGMS NIH HHS R01 GM067758Wellcome TrustWellcome Trust 081858
6 · The paper itself

Abstract

Localization of bicoid mRNA to the anterior of the Drosophila oocyte is essential for patterning the anteroposterior body axis in the early embryo. bicoid mRNA localizes in a complex multistep process involving transacting factors, molecular motors and cytoskeletal components that remodel extensively during the lifetime of the mRNA. Genetic requirements for several localization factors, including Swallow and Staufen, are well established, but the precise roles of these factors and their relationship to bicoid mRNA transport particles remains unresolved. Here we use live cell imaging, super-resolution microscopy in fixed cells and immunoelectron microscopy on ultrathin frozen sections to study the distribution of Swallow, Staufen, actin and dynein relative to bicoid mRNA during late oogenesis. We show that Swallow and bicoid mRNA are transported independently and are not colocalized at their final destination. Furthermore, Swallow is not required for bicoid transport. Instead, Swallow localizes to the oocyte plasma membrane, in close proximity to actin filaments, and we present evidence that Swallow functions during the late phase of bicoid localization by regulating the actin cytoskeleton. In contrast, Staufen, dynein and bicoid mRNA form nonmembranous, electron dense particles at the oocyte anterior. Our results exclude a role for Swallow in linking bicoid mRNA to the dynein motor. Instead we propose a model for bicoid mRNA localization in which Swallow is transported independently by dynein and contributes indirectly to bicoid mRNA localization by organizing the cytoskeleton, whereas Staufen plays a direct role in dynein-dependent bicoid mRNA transport.

Indexed as

ActinsAnimalsCell MembraneDrosophilaDrosophila ProteinsDyneinsEmbryo, NonmammalianGene Expression Regulation, DevelopmentalHomeodomain ProteinsIn Situ HybridizationMicroscopy, FluorescenceMicroscopy, ImmunoelectronOocytesOogenesisRNA-Binding ProteinsRNA, MessengerActinsbcd protein, DrosophilaDrosophila ProteinsDyneinsHomeodomain ProteinsRNA-Binding ProteinsRNA, Messengerstau protein, Drosophilaswa protein, DrosophilaTrans-Activators

Identifiers

PMID20023172
PMCPMC2796925
OpenAlexW2125653651

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.