Evidence map›Paper›PMID 20023147›Full record

ArticlePlant physiology2010

Genomic inventory and transcriptional analysis of Medicago truncatula transporters.

Vagner A Benedito, Haiquan Li, Xinbin Dai, Maren Wandrey, Ji He, Rakesh Kaundal, Ivone Torres-Jerez, S Karen Gomez, Maria J Harrison, Yuhong Tang and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
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  6. The Role of Soil Fungi in KInternational journal of molecular sciences · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Vagner A BeneditoGenetics and Developmental Biology Program, Division of Plant and Soil Sciences, West Virginia University, Morgantown, West Virginia 26506, USA.
Haiquan Li
Xinbin Dai
Maren Wandrey
Ji He
Rakesh Kaundal
Ivone Torres-Jerez
S Karen Gomez
Maria J Harrison
Yuhong Tang
Patrick X Zhao
Michael K Udvardi
West Virginia University · USCornell University · USNoble Research Institute · USMax Planck Institute of Molecular Plant Physiology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transporters move hydrophilic substrates across hydrophobic biological membranes and play key roles in plant nutrition, metabolism, and signaling and, consequently, in plant growth, development, and responses to the environment. To initiate and support systematic characterization of transporters in the model legume Medicago truncatula, we identified 3,830 transporters and classified 2,673 of these into 113 families and 146 subfamilies. Analysis of gene expression data for 2,611 of these transporters identified 129 that are expressed in an organ-specific manner, including 50 that are nodule specific and 36 specific to mycorrhizal roots. Further analysis uncovered 196 transporters that are induced at least 5-fold during nodule development and 44 in roots during arbuscular mycorrhizal symbiosis. Among the nodule- and mycorrhiza-induced transporter genes are many candidates for known transport activities in these beneficial symbioses. The data presented here are a unique resource for the selection and functional characterization of legume transporters.

Indexed as

Genome, PlantChromosome MappingExpressed Sequence TagsGene Expression ProfilingGene Expression Regulation, PlantGenes, PlantMedicago truncatulaMembrane Transport ProteinsOligonucleotide Array Sequence AnalysisPlant ProteinsPlant Root NodulationSequence Analysis, DNASequence Analysis, ProteinSymbiosisMembrane Transport ProteinsPlant Proteins

Identifiers

PMID20023147
PMCPMC2832251
OpenAlexW2054217164

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.