Evidence map›Paper›PMID 20019666›Full record

ArticleThe EMBO journal2010

DNA polymerase beta is critical for mouse meiotic synapsis.

Dawit Kidane, Alan S Jonason, Timothy S Gorton, Ivailo Mihaylov, Jing Pan, Scott Keeney, Dirk G de Rooij, Terry Ashley, Agnes Keh, Yanfeng Liu and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Genetic control of meiosis surveillance mechanisms in mammals.Frontiers in cell and developmental biology · 2023
    Review
  7. The Role of Natural Polymorphic Variants of DNA Polymerase β in DNA Repair.International journal of molecular sciences · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. G648C variant of DNA polymerase β sensitizes esophageal cancer to chemotherapy.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  14. Article
  15. Meiotic Recombination: The Essence of Heredity.Cold Spring Harbor perspectives in biology · 2015
    Review
  16. Enhancement of silencing DNA polymerase β on the radiotherapeutic sensitivity of human esophageal carcinoma cell lines.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  17. Cellular roles of DNA polymerase beta.The Yale journal of biology and medicine · 2013
    Review
  18. Review
  19. Article
  20. Clamping down on mammalian meiosis.Cell cycle (Georgetown, Tex.) · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Dawit KidaneDepartment of Therapeutic Radiology, The Yale Comprehensive Cancer Center, New Haven, CT, USA.
Alan S Jonason
Timothy S Gorton
Ivailo Mihaylov
Jing Pan
Scott Keeney
Dirk G de Rooij
Terry Ashley
Agnes Keh
Yanfeng Liu
Urmi Banerjee
Daniel Zelterman
Joann B Sweasy
Yale Cancer Center · USHoward Hughes Medical Institute · USMemorial Sloan Kettering Cancer Center · US

Funding

Mechanism of meiotic recombination in yeastR01GM058673 · NIGMS · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI KEENEY, SCOTT · 1999 to 2015
$6.0M
Characterization of a DNA Polymerase Beta Deficient MouseR01CA116753 · NCI · YALE UNIVERSITY · PI SWEASY, JOANN B. · 2006 to 2016
$2.8M
Howard Hughes Medical InstituteNCI NIH HHS CA116753NCI NIH HHS R01 CA116753NIGMS NIH HHS R01 GM058673
6 · The paper itself

Abstract

We have shown earlier that DNA polymerase beta (Pol beta) localizes to the synaptonemal complex (SC) during Prophase I of meiosis in mice. Pol beta localizes to synapsed axes during zygonema and pachynema, and it associates with the ends of bivalents during late pachynema and diplonema. To test whether these localization patterns reflect a function for Pol beta in recombination and/or synapsis, we used conditional gene targeting to delete the PolB gene from germ cells. We find that Pol beta-deficient spermatocytes are defective in meiotic chromosome synapsis and undergo apoptosis during Prophase I. We also find that SPO11-dependent gammaH2AX persists on meiotic chromatin, indicating that Pol beta is critical for the repair of SPO11-induced double-strand breaks (DSBs). Pol beta-deficient spermatocytes yielded reduced steady-state levels of the SPO11-oligonucleotide complexes that are formed when SPO11 is removed from the ends of DSBs, and cytological experiments revealed that chromosome-associated foci of replication protein A (RPA), RAD51 and DMC1 are less abundant in Pol beta-deficient spermatocyte nuclei. Localization of Pol beta to meiotic chromosomes requires the formation of SPO11-dependent DSBs. Taken together, these findings strongly indicate that Pol beta is required at a very early step in the processing of meiotic DSBs, at or before the removal of SPO11 from DSB ends and the generation of the 3' single-stranded tails necessary for subsequent strand exchange. The chromosome synapsis defects and Prophase I apoptosis of Pol beta-deficient spermatocytes are likely a direct consequence of these recombination defects.

Indexed as

Chromosome PairingMeiosisAnimalsChromosomesDNA Breaks, Double-StrandedDNA Polymerase betaDNA RepairEndodeoxyribonucleasesEsterasesFemaleGene DeletionMaleMeiotic Recombination Protein SPO11MiceSeminiferous TubulesSpermatocytesDNA Polymerase betaEndodeoxyribonucleasesEsterasesMeiotic Recombination Protein SPO11

Identifiers

PMID20019666
PMCPMC2824467
OpenAlexW2161855535

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.