Evidence map›Paper›PMID 20016852›Full record

ArticlePloS one2009

Genetic variation of the human urinary tract innate immune response and asymptomatic bacteriuria in women.

Thomas R Hawn, Delia Scholes, Hongwei Wang, Sue S Li, Ann E Stapleton, Marta Janer, Alan Aderem, Walter E Stamm, Lue Ping Zhao, Thomas M Hooton

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 82 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Evasion of toll-like receptor recognition byFrontiers in microbiology · 2023
    Article
  6. Review
  7. Medicina (Kaunas, Lithuania) · 2022
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Toll-like receptor signaling in primary immune deficiencies.Annals of the New York Academy of Sciences · 2015
    Review
  17. Observational
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Thomas R HawnDepartment of Medicine, University of Washington, Seattle, Washington, USA. thawn@u.washington.edu
Delia Scholes
Hongwei Wang
Sue S Li
Ann E Stapleton
Marta Janer
Alan Aderem
Walter E Stamm
Lue Ping Zhao
Thomas M Hooton
Fred Hutch Cancer Center · USUniversity of Washington · USInstitute for Systems Biology · USHealth Center · USUniversity of Miami · US

Funding

Prevention of UTI With A Vaginal ProbioticP01DK053369 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAMM, WALTER E · 1998 to 2007
$8.5M
ROLE OF BLADDER AND VAGINAL EPITHELIAL CAVEOLAE IN UTIsR01DK062863 · NIDDK · UNIVERSITY OF WASHINGTON · PI STAPLETON, ANN E · 2003 to 2007
$919k
NIDDK NIH HHS 2P01 DK53369-11NIDDK NIH HHS P01 DK053369NIDDK NIH HHS R01 DK062863
6 · The paper itself

Abstract

backgroundAlthough several studies suggest that genetic factors are associated with human UTI susceptibility, the role of DNA variation in regulating early in vivo urine inflammatory responses has not been fully examined. We examined whether candidate gene polymorphisms were associated with altered urine inflammatory profiles in asymptomatic women with or without bacteriuria. METHODOLOGY: We conducted a cross-sectional analysis of asymptomatic bacteriuria (ASB) in 1,261 asymptomatic women ages 18-49 years originally enrolled as participants in a population-based case-control study of recurrent UTI and pyelonephritis. We genotyped polymorphisms in CXCR1, CXCR2, TLR1, TLR2, TLR4, TLR5, and TIRAP in women with and without ASB. We collected urine samples and measured levels of uropathogenic bacteria, neutrophils, and chemokines. PRINCIPAL

findingsPolymorphism TLR2_G2258A, a variant associated with decreased lipopeptide-induced signaling, was associated with increased ASB risk (odds ratio 3.44, 95%CI; 1.65-7.17). Three CXCR1 polymorphisms were associated with ASB caused by gram-positive organisms. ASB was associated with urinary CXCL-8 levels, but not CXCL-5, CXCL-6, or sICAM-1 (P< or =0.0001). Urinary levels of CXCL-8 and CXCL-6, but not ICAM-1, were associated with higher neutrophil levels (P< or =0.0001). In addition, polymorphism CXCR1_G827C was associated with increased CXCL-8 levels in women with ASB (P = 0.004).

conclusionsTLR2 and CXCR1 polymorphisms were associated with ASB and a CXCR1 variant was associated with urine CXCL-8 levels. These results suggest that genetic factors are associated with early in vivo human bladder immune responses prior to the development of symptomatic UTIs.

Indexed as

Genetic VariationAdultBacteriuriaChemokinesDemographyFemaleGram-Negative BacteriaHumansImmunity, InnateInterleukin-8NeutrophilsPolymorphism, Single NucleotideReceptors, Interleukin-8AReceptors, Interleukin-8BToll-Like Receptor 2Urinary TractChemokinesCXCL8 protein, humanInterleukin-8Receptors, Interleukin-8AReceptors, Interleukin-8BTLR2 protein, humanToll-Like Receptor 2

Identifiers

PMID20016852
PMCPMC2788705
OpenAlexW2055898731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.