Evidence map›Paper›PMID 20015999›Full record

ArticleJournal of virology2010

Genomewide association analysis of respiratory syncytial virus infection in mice.

James M Stark, M Michael Barmada, Abby V Winterberg, Nilanjana Majumber, William J Gibbons, Marilyn A Stark, Maureen A Sartor, Mario Medvedovic, Jay Kolls, Kiflai Bein and 5 more

Abstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Inter-individual variation in health and disease associated with pulmonary infectious agents.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Respiratory syncytial virus--a comprehensive review.Clinical reviews in allergy & immunology · 2013
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

James M StarkDepartment of Pediatrics, University of Texas Health Science Center, Houston, Texas, USA. starkj@childrensdayton.org
M Michael Barmada
Abby V Winterberg
Nilanjana Majumber
William J Gibbons
Marilyn A Stark
Maureen A Sartor
Mario Medvedovic
Jay Kolls
Kiflai Bein
Beena Mailaparambil
Marcus Krueger
Andrea Heinzmann
George D Leikauf
Daniel R Prows
University of Pittsburgh · USUniversity of Cincinnati · USCincinnati Children's Hospital Medical Center · USThe University of Texas Health Science Center at Houston · USUniversity Medical Center Freiburg · DEUniversity of Freiburg · DE

Funding

Improving our mechanistic understanding of Electronic-cigarette, or vaping, product use-associated lung injuryU01ES015675 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2006 to 2020
$8.9M
Genetic Analysis of Hyperoxia Induced Acute Lung InjuryR01HL075562 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI PROWS, DANIEL R · 2004 to 2012
$3.0M
Growth Factor Protection in Acute Lung InjuryR01HL077763 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2006 to 2009
$1.4M
Bayesian Mixture Modeling of Functional Genomics DataR01HG003749 · NHGRI · UNIVERSITY OF CINCINNATI · PI MEDVEDOVIC, MARIO · 2006 to 2009
$1.4M
Role of Metalloproteinases in Mucin Overproduction in COPDR01HL085655 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2008 to 2011
$1.4M
Genetic Determinants of RSV Susceptibility in MiceR01AI046556 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI STARK, JAMES M · 2001 to 2004
$1.2M
Genetic Analysis of Hyperoxia Induced Acute Lung InjuryR56HL075562 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI PROWS, DANIEL R · 2008 to 2008
$378k
Integrative Probabilistic Models for Identifying Transcriptional ModulesR21LM009662 · NLM · UNIVERSITY OF CINCINNATI · PI MEDVEDOVIC, MARIO · 2008 to 2009
$374k
NHGRI NIH HHS HG003749NHGRI NIH HHS R01 HG003749NHLBI NIH HHS HL075562NHLBI NIH HHS HL077763NHLBI NIH HHS HL085655NHLBI NIH HHS R01 HL075562NHLBI NIH HHS R01 HL077763NHLBI NIH HHS R01 HL085655NHLBI NIH HHS R56 HL075562NIAID NIH HHS AI046556NIAID NIH HHS R01 AI046556NIEHS NIH HHS ES015675NIEHS NIH HHS U01 ES015675NLM NIH HHS LM009662NLM NIH HHS R21 LM009662
6 · The paper itself

Abstract

Respiratory syncytial virus (RSV) is the major cause of lower respiratory tract infection in infants, with about half being infected in their first year of life. Yet only 2 to 3% of infants are hospitalized for RSV infection, suggesting that individual susceptibility contributes to disease severity. Previously, we determined that AKR/J (susceptible) mice developed high lung RSV titers and showed delayed weight recovery, whereas C57BL/6J (resistant) mice demonstrated low lung RSV titers and rapid weight recovery. In addition, we have reported that gene-targeted mice lacking the cystic fibrosis transmembrane conductance regulator (Cftr; ATP-binding cassette subfamily C, member 7) are susceptible to RSV infection. For this report, recombinant backcross and F2 progeny derived from C57BL/6J and AKR/J mice were infected with RSV, their lung titers were measured, and quantitative trait locus (QTL) analysis was performed. A major QTL, designated Rsvs1, was identified on proximal mouse chromosome 6 in both recombinant populations. Microarray analysis comparing lung transcripts of the parental strains during infection identified several candidate genes that mapped to the Rsvs1 interval, including Cftr. These findings add to our understanding of individual RSV susceptibility and strongly support a modifier role for CFTR in RSV infection, a significant cause of respiratory morbidity in infants with cystic fibrosis.

Indexed as

Disease SusceptibilityGenome-Wide Association StudyAnimalsChildChild, PreschoolChromosome MappingCystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorFemaleHumansInfantLod ScoreLungMaleMiceMice, Inbred AKRCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID20015999
PMCPMC2820899
OpenAlexW2069347098

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.