Evidence map›Paper›PMID 20015888›Full record

ArticleHaematologica2010

UNC13D is the predominant causative gene with recurrent splicing mutations in Korean patients with familial hemophagocytic lymphohistiocytosis.

Hoi Soo Yoon, Hee-Jin Kim, Keon-Hee Yoo, Ki-Woong Sung, Hong-Hoe Koo, Hyoung Jin Kang, Hee Young Shin, Hyo Seop Ahn, Ji-Yoon Kim, Young-Tak Lim and 10 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Haematologica, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01547143 (Pilot Study of First-line Immunosuppressive Therapy Combined With Etoposide and Allogeneic Hematopoietic Cell Transplantation in Refractory/Reactivated Cases for Hemophagocytic Lymphohistiocytosis), which is not on this map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01547143 naterminatednot on this mapstarted 2012, after this paper: background citation

Pilot Study of First-line Immunosuppressive Therapy Combined With Etoposide and Allogeneic Hematopoietic Cell Transplantation in Refractory/Reactivated Cases for Hemophagocytic Lymphohistiocytosis (HLH) in Adult Patients

TypeinterventionalSponsorAsan Medical CenterRan2012 to 2016Enrolled12ConditionsHemophagocytic LymphohistiocytosisArmsIST and/or alloHCT
3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 53 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 9 institutions in 2 countries.

Hoi Soo YoonDepartment of Laboratory Medicine & Genetics, Samsung Medical Center, Sungkyunkwan University School of Medicine, 50 Ilwon-dong, Gangnam-gu, Seoul, Korea.
Hee-Jin Kim
Keon-Hee Yoo
Ki-Woong Sung
Hong-Hoe Koo
Hyoung Jin Kang
Hee Young Shin
Hyo Seop Ahn
Ji-Yoon Kim
Young-Tak Lim
Keun-Wook Bae
Ki-O Lee
Ji-Sook Shin
Seung-Tae Lee
Hae-Sun Chung
Sun-Hee Kim
Chan-Jeoung Park
Hyun-Sook Chi
Ho-Joon Im
Jong Jin Seo
Samsung Medical Center · KRPediatrics and Genetics · USSeoul National University Hospital · KRUniversity of Ulsan · KRAsan Medical Center · KRChungbuk National University Hospital · KRPusan National University Hospital · KRSungkyunkwan University · KRUlsan College · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFamilial hemophagocytic lymphohistiocytosis is a fatal disease characterized by immune dysregulation from defective function of cytotoxic lymphocytes. Three causative genes have been identified for this autosomal recessive disorder (PRF1, UNC13D, and STX11). We investigated the molecular genetics of familial hemophagocytic lymphohistiocytosis in Korea. DESIGN AND

methodsPediatric patients who fulfilled the HLH-2004 criteria were recruited from the Korean Registry for Histiocytosis. Molecular genetic studies were performed on the patients' DNA samples by direct sequencing of all coding exons and flanking sequences of PRF1, UNC13D, and STX11.

resultsForty patients were studied and familial hemophagocytic lymphohistiocytosis mutations were identified in nine; eight patients had UNC13D mutations (89%) and one had a mutation in PRF1. No patient had a STX11 mutation. Notably, four patients had only one UNC13D mutant allele, suggesting that the other mutation was missed by conventional direct sequencing. All UNC13D mutations were deleterious in nature. One known splicing mutation, c.754-1G>C, was recurrent, accounting for 58% of all the mutant alleles (7/12). Five UNC13D mutations were novel (p.Gln98X, p.Glu565SerfsX7, c.1993-2A>G, c.2367+1G>A, and c.2954+5G>A). The one patient with PRF1 mutation was homozygous for a frameshift mutation (p.Leu364GlufsX93), which was previously reported to be the most frequent PRF1 mutation in Japan.

conclusionsThis is the first investigation on the molecular genetics of familial hemophagocytic lymphohistiocytosis in Korea. The data showed that UNC13D is the predominant causative gene in the Korean population. The identification of mutations missed by conventional sequencing would better delineate the mutation spectrum and help to establish the optimal molecular diagnostic strategy for familial hemophagocytic lymphohistiocytosis in Korea, which might need an RNA-based screening strategy.

Indexed as

Genetic Predisposition to DiseaseAdolescentAlternative SplicingChildChild, PreschoolDNAExonsFemaleHomozygoteHumansInfantInfant, NewbornKoreaLymphohistiocytosis, HemophagocyticMaleMembrane ProteinsDNAMembrane ProteinsPerforinPore Forming Cytotoxic ProteinsPRF1 protein, humanQa-SNARE ProteinsSTX11 protein, humanUNC13D protein, human

Identifiers

PMID20015888
PMCPMC2857192
OpenAlexW2142722822

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.