Evidence map›Paper›PMID 20015870›Full record

ArticleGlycobiology2010

Physiological and glycomic characterization of N-acetylglucosaminyltransferase-IVa and -IVb double deficient mice.

Shinji Takamatsu, Aristotelis Antonopoulos, Kazuaki Ohtsubo, David Ditto, Yasunori Chiba, Dzung T Le, Howard R Morris, Stuart M Haslam, Anne Dell, Jamey D Marth and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Glycobiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
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  10. What is the Sugar Code?Chembiochem : a European journal of chemical biology · 2022
    Review
  11. N-Glycosylation.Advances in experimental medicine and biology · 2021
    Article
  12. 3D Structure and Function of Glycosyltransferases Involved inInternational journal of molecular sciences · 2020
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 3 countries.

Shinji TakamatsuDepartment of Disease Glycomics, The institute of Scientific and Industrial Research, Osaka University, 8-1 Mihogaoka, Ibaraki, 567-0041, Japan.
Aristotelis Antonopoulos
Kazuaki Ohtsubo
David Ditto
Yasunori Chiba
Dzung T Le
Howard R Morris
Stuart M Haslam
Anne Dell
Jamey D Marth
Naoyuki Taniguchi
Imperial College London · GBOsaka University · JPUniversity of California, San Diego · USNational Institute of Advanced Industrial Science and Technology · JPUniversity of California, Santa Barbara · US

Funding

GLYCOSYLTRANSFERASE FUNCTION IN DEVELOPMENT AND DISEASER01DK048247 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JAMEY MARTH · 1994 to 2026
$9.4M
Biotechnology and Biological Sciences Research Council B19088Biotechnology and Biological Sciences Research Council BBF008309Howard Hughes Medical InstituteNIDDK NIH HHS DK48247
6 · The paper itself

Abstract

N-Acetylglucosaminyltransferase-IV (GnT-IV) has two isoenzymes, GnT-IVa and GnT-IVb, which initiate the GlcNAcbeta1-4 branch synthesis on the Manalpha1-3 arm of the N-glycan core thereby increasing N-glycan branch complexity and conferring endogenous lectin binding epitopes. To elucidate the physiological significance of GnT-IV, we engineered and characterized GnT-IVb-deficient mice and further generated GnT-IVa/-IVb double deficient mice. In wild-type mice, GnT-IVa expression is restricted to gastrointestinal tissues, whereas GnT-IVb is broadly expressed among organs. GnT-IVb deficiency induced aberrant GnT-IVa expression corresponding to the GnT-IVb distribution pattern that might be attributed to increased Ets-1, which conceivably activates the Mgat4a promoter, and thereafter preserved apparent GnT-IV activity. The compensative GnT-IVa expression might contribute to amelioration of the GnT-IVb-deficient phenotype. GnT-IVb deficiency showed mild phenotypic alterations in hematopoietic cell populations and hemostasis. GnT-IVa/-IVb double deficiency completely abolished GnT-IV activity that resulted in the disappearance of the GlcNAcbeta1-4 branch on the Manalpha1-3 arm that was confirmed by MALDI-TOF MS and GC-MS linkage analyses. Comprehensive glycomic analyses revealed that the abundance of terminal moieties was preserved in GnT-IVa/-IVb double deficiency that was due to the elevated expression of glycosyltransferases regarding synthesis of terminal moieties. Thereby, this may maintain the expression of glycan ligands for endogenous lectins and prevent cellular dysfunctions. The fact that the phenotype of GnT-IVa/-IVb double deficiency largely overlapped that of GnT-IVa single deficiency can be attributed to the induced glycomic compensation. This is the first report that mammalian organs have highly organized glycomic compensation systems to preserve N-glycan branch complexity.

Indexed as

GlycomicsAnimalsGlycosyltransferasesIsoenzymesLectinsMiceN-AcetylglucosaminyltransferasesPolysaccharidesSpectrometry, Mass, Matrix-Assisted Laser Desorption-Ionizationalpha-1,3-mannosylglycoprotein beta-1,4-N-acetylglucosaminyltransferaseGlycosyltransferasesIsoenzymesLectinsN-AcetylglucosaminyltransferasesPolysaccharides

Identifiers

PMID20015870
PMCPMC2900882
OpenAlexW2171124270

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.