Evidence map›Paper›PMID 20013806›Full record

ArticleInternational journal of cancer2010

Lack of HLA class II antigen expression in microsatellite unstable colorectal carcinomas is caused by mutations in HLA class II regulatory genes.

Sara Michel, Michael Linnebacher, Joshua Alcaniz, Maike Voss, Rudolf Wagner, Wolfgang Dippold, Christina Becker, Magnus von Knebel Doeberitz, Soldano Ferrone, Matthias Kloor

Open access · bronzeAbstract read
In one paragraph

Article in International journal of cancer, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 2 countries.

Sara MichelDepartment of Applied Tumor Biology, Institute of Pathology, University of Heidelberg, Molecular Medicine Partnership Unit, Heidelberg, Germany.
Michael Linnebacher
Joshua Alcaniz
Maike Voss
Rudolf Wagner
Wolfgang Dippold
Christina Becker
Magnus von Knebel Doeberitz
Soldano Ferrone
Matthias Kloor
German Cancer Research Center · DEHeidelberg University · DESt. Elisabeth-Hospital Bochum · DEUniversity of Rostock · DEUPMC Hillman Cancer Center · USWestpfalz Klinikum · DE

Funding

Tissue Procurement / ImmunohistologyP01CA109688 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SCHLESSELMAN, JAMES J · 2006 to 2010
$5.9M
TCR Affinity and Therapeutic Efficacy of T CellsR01CA104947 · NCI · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI NISHIMURA, MICHAEL I. · 2007 to 2011
$1.9M
NCI NIH HHS P01 CA109688NCI NIH HHS R01 CA104947
6 · The paper itself

Abstract

Colorectal cancers (CRCs) develop on the basis of a deficient DNA mismatch repair (MMR) system in about 15% of cases. MMR-deficient CRC lesions show high-level microsatellite instability (MSI-H) and accumulate numerous mutations located at coding microsatellite loci that lead to the generation of immunogenic neopeptides. Consequently, the host's antitumoral immune response is of high importance for the course of the disease in MSI-H CRC patients. Accordingly, immune evasion mediated by impairment of HLA class I antigen presentation is frequently observed in these cancers. In this study, we aimed at a systematic analysis of alterations affecting HLA class II antigen expression in MSI-H CRC. HLA class II antigens are expressed by only two-thirds of MSI-H CRCs. The mechanisms underlying the lack of HLA class II antigens in a subset of MSI-H CRCs remain unknown. We here screened HLA class II regulatory genes for the presence of coding microsatellites and identified mutations of the essential regulator genes RFX5 in 9 (26.9%) out of 34 and CIITA in 1 (2.9%) out of 34 MSI-H CRCs. RFX5 mutations were related to lack of or faint HLA class II antigen expression (p = 0.006, Fisher's exact test). Transfection with wild-type RFX5 was sufficient to restore interferon gamma-inducible HLA class II antigen expression in the RFX5-mutant cell line HDC108. We conclude that somatic mutations of the RFX5 gene represent a novel mechanism of loss of HLA class II antigen expression in tumor cells, potentially contributing to immune evasion in MSI-H CRCs.

Indexed as

Microsatellite InstabilityColorectal NeoplasmsDNA-Binding ProteinsDNA MethylationFrameshift MutationHistocompatibility Antigens Class IIHumansMicrosatellite RepeatsNuclear ProteinsPrognosisPromoter Regions, GeneticRegulatory Factor X Transcription FactorsTrans-ActivatorsTumor Cells, CulturedDNA-Binding ProteinsHistocompatibility Antigens Class IIMHC class II transactivator proteinNuclear ProteinsRegulatory Factor X Transcription FactorsRFX5 protein, humanTrans-Activators

Identifiers

PMID20013806
PMCPMC2892639
OpenAlexW2000771981

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.