Evidence map›Paper›PMID 20003455›Full record

ArticleBMC molecular biology2009

Characterization of the transcripts and protein isoforms for cytoplasmic polyadenylation element binding protein-3 (CPEB3) in the mouse retina.

Xiang-Ping Wang, Nigel G F Cooper

Open access · hybridAbstract read
In one paragraph

Article in BMC molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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  5. CPEB3 inhibits translation of mRNA targets by localizing them to P bodies.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Xiang-Ping WangDepartment of Anatomical Sciences and Neurobiology, Health Sciences Campus, 500 S, Preston Street, University of Louisville, Louisville, KY, USA. x0wang04@gwise.louisville.edu
Nigel G F Cooper
University of Louisville · US

Funding

The Role of CaMKII in Cell Death and Survival Responses of Retinal Ganglion CellsR01EY017594 · NEI · UNIVERSITY OF LOUISVILLE · PI COOPER, NIGEL G.F. · 2008 to 2011
$1.4M
NEI NIH HHS NEI R01EY017594PHS HHS NCRR P20 RR16481PHS HHS NIEHS P30ESO14443
6 · The paper itself

Abstract

backgroundCytoplasmic polyadenylation element binding proteins (CPEBs) regulate translation by binding to regulatory motifs of defined mRNA targets. This translational mechanism has been shown to play a critical role in oocyte maturation, early development, and memory formation in the hippocampus. Little is known about the presence or functions of CPEBs in the retina. The purpose of the current study is to investigate the alternative splicing isoforms of a particular CPEB, CPEB3, based on current databases, and to characterize the expression of CPEB3 in the retina.

resultsIn this study, we have characterized CPEB3, whose putative role is to regulate the translation of GluR2 mRNA. We identify the presence of multiple alternative splicing isoforms of CPEB3 transcripts and proteins in the current databases. We report the presence of eight alternative splicing patterns of CPEB3, including a novel one, in the mouse retina. All but one of the patterns appear to be ubiquitous in 13 types of tissue examined. The relative abundance of the patterns in the retina is demonstrated. Experimentally, we show that CPEB3 expression is increased in a time-dependent manner during the course of postnatal development, and CPEB3 is localized mostly in the inner retina, including retinal ganglion cells.

conclusionThe level of CPEB3 was up-regulated in the retina during development. The presence of multiple CPEB3 isoforms indicates remarkable complexity in the regulation and function of CPEB3.

Indexed as

Alternative SplicingTranscription, GeneticAnimalsDatabases, GeneticGene Expression Regulation, DevelopmentalMiceMice, Inbred C57BLProtein IsoformsRetinaRNA-Binding ProteinsUp-RegulationCpeb3 protein, mouseProtein IsoformsRNA-Binding Proteins

Identifiers

PMID20003455
PMCPMC2807433
OpenAlexW1999532348

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.