Evidence map›Paper›PMID 20003413›Full record

ArticleBMC molecular biology2009

Nuclear factor I-A represses expression of the cell adhesion molecule L1.

Tanja Schneegans, Uwe Borgmeyer, Moritz Hentschke, Richard M Gronostajski, Melitta Schachner, Thomas Tilling

Abstract read
In one paragraph

Article in BMC molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tanja SchneegansZentrum für Molekulare Neurobiologie, Universitätsklinikum Hamburg-Eppendorf, D-20246 Hamburg, Germany. Tanja.Schneegans@gmx.de
Uwe Borgmeyer
Moritz Hentschke
Richard M Gronostajski
Melitta Schachner
Thomas Tilling

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe neural cell adhesion molecule L1 plays a crucial role in development and plasticity of the nervous system. Neural cells thus require precise control of L1 expression.

resultsWe identified a full binding site for nuclear factor I (NFI) transcription factors in the regulatory region of the mouse L1 gene. Electrophoretic mobility shift assay (EMSA) showed binding of nuclear factor I-A (NFI-A) to this site. Moreover, for a brain-specific isoform of NFI-A (NFI-A bs), we confirmed the interaction in vivo using chromatin immunoprecipitation (ChIP). Reporter gene assays showed that in neuroblastoma cells, overexpression of NFI-A bs repressed L1 expression threefold.

conclusionOur findings suggest that NFI-A, in particular its brain-specific isoform, represses L1 gene expression, and might act as a second silencer of L1 in addition to the neural restrictive silencer factor (NRSF).

Indexed as

Down-RegulationAmino Acid SequenceAnimalsBase SequenceBinding SitesBrainCell LineCricetinaeIntronsMiceMolecular Sequence DataNeural Cell Adhesion Molecule L1NeuroblastomaNFI Transcription FactorsOrgan SpecificityProtein IsoformsNeural Cell Adhesion Molecule L1NFI Transcription FactorsProtein Isoforms

Identifiers

PMID20003413
PMCPMC2805660

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.