Evidence map›Paper›PMID 19996606›Full record

ArticleHuman heredity2010

Robust age at onset linkage analysis in nuclear families.

Andrea Callegaro, J C van Houwelingen, J J Houwing-Duistermaat

Abstract read
In one paragraph

Article in Human heredity, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Andrea CallegaroDepartment of Medical Statistics and Bioinformatics, Leiden University Medical Center, University of Leiden, Leiden, The Netherlands. a.callegaro@lumc.nl
J C van Houwelingen
J J Houwing-Duistermaat

Funding

GENETIC ANALYSIS OF COMMON DISEASES: AN EVALUATIONR01GM031575 · NIGMS · UNIVERSITY OF TEXAS RIO GRANDE VALLEY · PI ALMASY, LAURA A. · 1985 to 2016
$7.8M
NIGMS NIH HHS R01 GM031575
6 · The paper itself

Abstract

objectiveStandard methods for linkage analysis ignore the phenotype of the parents when they are not genotyped. However, this information can be useful for gene mapping. In this paper we propose methods for age at onset genetic linkage analysis in sibling pairs, taking into account parental age at onset.

methodsTwo new score statistics are derived, one from an additive gamma frailty model and one from a log-normal frailty model. The score statistics are classical non-parametric linkage (NPL) statistics weighted by a function of the age at onset of the four family members. The weight depends on information from registries (age-specific incidences) and family studies (sib-sib and father-mother correlation).

resultsIn order to investigate how age at onset of sibs and their parents affect the information for linkage analysis the weight functions were studied for rare and common disease models, realistic models for breast cancer and human lifespan. We studied the performance of the weighted NPL methods by simulations. As illustration, the score statistics were applied to the GAW12 data. The results show that it is useful to include parental age at onset information in genetic linkage analysis.

Indexed as

Age of OnsetGenetic Association StudiesModels, GeneticBreast NeoplasmsFemaleHumansLife ExpectancyMaleNuclear FamilyParentsSiblingsStatistics, Nonparametric

Identifiers

PMID19996606
PMCPMC2956010

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.