Evidence map›Paper›PMID 19995852›Full record

ReviewThe Journal of physiology2010

Atomic structure and dynamics of pentameric ligand-gated ion channels: new insight from bacterial homologues.

Pierre-Jean Corringer, Marc Baaden, Nicolas Bocquet, Marc Delarue, Virginie Dufresne, Hugues Nury, Marie Prevost, Catherine Van Renterghem

Open access · greenAbstract readReview
In one paragraph

Review in The Journal of physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 109 citations in OpenAlex.

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  12. The neural γJournal of molecular modeling · 2018
    Article
  13. GABANeuropharmacology · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Pierre-Jean CorringerPasteur Institute, G5 Group of Channel-Receptor, CNRS URA 2182, 75015 Paris, France. pjcorrin@pasteur.fr
Marc Baaden
Nicolas Bocquet
Marc Delarue
Virginie Dufresne
Hugues Nury
Marie Prevost
Catherine Van Renterghem
Institut Pasteur · FRCentre National de la Recherche Scientifique · FRInstitut de Biologie Physico-Chimique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pentameric ligand-gated ion channels (pLGICs) are widely expressed in the animal kingdom and are key players of neurotransmission by acetylcholine (ACh), gamma-amminobutyric acid (GABA), glycine and serotonin. It is now established that this family has a prokaryotic origin, since more than 20 homologues have been discovered in bacteria. In particular, the GLIC homologue displays a ligand-gated ion channel function and is activated by protons. The prokaryotic origin of these membrane proteins facilitated the X-ray structural resolution of the first members of this family. ELIC was solved at 3.3 A in a closed-pore conformation, and GLIC at up to 2.9 A in an apparently open-pore conformation. These data reveal many structural features, notably the architecture of the pore, including its gate and its selectivity filter, and the interactions between the protein and lipids. In addition, comparison of the structures of GLIC and ELIC hints at a mechanism of channel opening, which consists of both a quaternary twist and a tertiary deformation. This mechanism couples opening-closing motions of the channel with a global reorganization of the protein, including the subunit interface that holds the neurotransmitter binding sites in eukaryotic pLGICs.

Indexed as

Ion Channel GatingAmino Acid SequenceBacterial ProteinsCrystallography, X-RayIon ChannelsMolecular Sequence DataProtein Structure, QuaternaryProtein Structure, TertiaryReceptors, NeurotransmitterBacterial ProteinsIon ChannelsReceptors, Neurotransmitter

Identifiers

PMID19995852
PMCPMC2828131
OpenAlexW1891868372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.