ArticleBiology direct2009
Depauperate genetic variability detected in the American and European bison using genomic techniques.
Article in Biology direct, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
10 citing papers in PubMed.
- A reduced SNP panel optimised for non-invasive genetic assessment of a genetically impoverished conservation icon, the European bison.Scientific reports · 2024Article
- From STRs to SNPs via ddRAD-seq: Geographic assignment of confiscated tortoises at reduced costs.Evolutionary applications · 2022Article
- Three new genes associated with longevity in the European Bison.Veterinary and animal science · 2022Article
- In Search of Species-Specific SNPs in a Non-Model Animal (European Bison (Animals : an open access journal from MDPI · 2021Article
- Prevalence of Ineffective Haplotypes at the Rice Blast Resistance (R) Gene Loci in Chinese Elite Hybrid Rice Varieties Revealed by Sequence-Based Molecular Diagnosis.Rice (New York, N.Y.) · 2020Article
- Complex Admixture Preceded and Followed the Extinction of Wisent in the Wild.Molecular biology and evolution · 2017Article
- A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling.BMC genomics · 2016Article
- Genome-wide association study for posthitis in the free-living population of European bison (Bison bonasus).Biology direct · 2015Article
- Targeted amplicon sequencing (TAS): a scalable next-gen approach to multilocus, multitaxa phylogenetics.Genome biology and evolution · 2011Article
- A global view of 54,001 single nucleotide polymorphisms (SNPs) on the Illumina BovineSNP50 BeadChip and their transferability to water buffalo.International journal of biological sciences · 2010Article
Corrections and comments
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Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A total of 929 polymorphic SNPs in EB (out of 54, 000 SNPs screened using a BovineSNP50 Illumina Genotyping BeadChip), and 1, 524 and 1, 403 polymorphic SNPs in WB and PB, respectively, were analysed. EB, WB and PB have all undergone recent drastic reductions in population size. Accordingly, they exhibited extremely depauperate genomes, deviations from genetic equilibrium and a genome organization consisting of a mosaic of haplotype blocks: regions with low haplotype diversity and high levels of linkage disequilibrium. No evidence for positive or stabilizing selection was found in EB, WB and PB, likely reflecting drift overwhelming selection. We suggest that utilization of genome-wide screening technologies, followed by utilization of less expensive techniques (e.g. VeraCode and Fluidigm EP1), holds large potential for genetic monitoring of populations. Additionally, these techniques will allow radical improvements of breeding practices in captive or managed populations, otherwise hampered by the limited availability of polymorphic markers. This result in improved possibilities for 1) estimating genetic relationships among individuals and 2) designing breeding strategies which attempt to preserve or reduce polymorphism in ecologically relevant genes and/or entire blocks.
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