Evidence map›Paper›PMID 19969520›Full record

ArticleMolecular plant2010

Farnesylcysteine lyase is involved in negative regulation of abscisic acid signaling in Arabidopsis.

David H Huizinga, Ryan Denton, Kelly G Koehler, Ashley Tomasello, Lyndsay Wood, Stephanie E Sen, Dring N Crowell

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Genetic Dissection of Root Angle ofFrontiers in plant science · 2021
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  6. Transcriptomes Divergence ofFrontiers in genetics · 2018
    Article
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

David H HuizingaDepartment of Biology, Indiana University-Purdue University Indianapolis, Indianapolis, IN 46202, USA.
Ryan Denton
Kelly G Koehler
Ashley Tomasello
Lyndsay Wood
Stephanie E Sen
Dring N Crowell
College of New Jersey · USUniversity of Indianapolis · USIdaho State University · USIndiana University – Purdue University Indianapolis · US

Funding

UNDERGRADUATE COLLEGE OUTREACH PROGRAMP20RR016454 · NCRR · UNIVERSITY OF IDAHO · PI CHASE, JENNIFER R · 2001 to 2011
$35.3M
NCRR NIH HHS P20RR16454
6 · The paper itself

Abstract

The Arabidopsis FCLY gene encodes a specific farnesylcysteine (FC) lyase, which is responsible for the oxidative metabolism of FC to farnesal and cysteine. In addition, fcly mutants with quantitative decreases in FC lyase activity exhibit an enhanced response to ABA. However, the enzymological properties of the FCLY-encoded enzyme and its precise role in ABA signaling remain unclear. Here, we show that recombinant Arabidopsis FC lyase expressed in insect cells exhibits high selectivity for FC as a substrate and requires FAD and molecular oxygen for activity. Arabidopsis FC lyase is also shown to undergo post-translational N-glycosylation. FC, which is a competitive inhibitor of isoprenylcysteine methyltransferase (ICMT), accumulates in fcly mutants. Moreover, the enhanced response of fcly mutants to ABA is reversed by ICMT overexpression. These observations support the hypothesis that the ABA hypersensitive phenotype of fcly plants is the result of FC accumulation and inhibition of ICMT.

Indexed as

Abscisic AcidAmino Acid SequenceArabidopsisArabidopsis ProteinsCarbon-Sulfur LyasesCysteineMolecular Sequence DataPlants, Genetically ModifiedSignal TransductionAbscisic AcidArabidopsis ProteinsCarbon-Sulfur LyasesCysteinefarnesylcysteine lyase, ArabidopsisS-farnesylcysteine

Identifiers

PMID19969520
PMCPMC2807925
OpenAlexW1966908220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.