Evidence map›Paper›PMID 19966799›Full record

ArticleNature structural & molecular biology2010

A promiscuous alpha-helical motif anchors viral hijackers and substrate receptors to the CUL4-DDB1 ubiquitin ligase machinery.

Ti Li, Eva I Robert, Pieter C van Breugel, Michel Strubin, Ning Zheng

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 224 citations in OpenAlex.

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  12. Structural basis of the hepatitis B virus X protein in complex with DDB1.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Review
  14. Article
  15. Impairment of DET1 causes neurological defects and lethality in mice and humans.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ti LiDepartment of Pharmacology, University of Washington, Seattle, Washington, USA.
Eva I Robert
Pieter C van Breugel
Michel Strubin
Ning Zheng
University of Washington · US

Funding

Structural Studies of cullin-based ubiquitin ligasesR01CA107134 · NCI · UNIVERSITY OF WASHINGTON · PI ZHENG, NING · 2004 to 2013
$3.0M
Howard Hughes Medical InstituteNCI NIH HHS CA107134NCI NIH HHS R01 CA107134
6 · The paper itself

Abstract

The cullin 4-DNA-damage-binding protein 1 (CUL4-DDB1) ubiquitin ligase machinery regulates diverse cellular functions and can be subverted by pathogenic viruses. Here we report the crystal structure of DDB1 in complex with a central fragment of hepatitis B virus X protein (HBx), whose DDB1-binding activity is important for viral infection. The structure reveals that HBx binds DDB1 through an alpha-helical motif, which is also found in the unrelated paramyxovirus SV5-V protein despite their sequence divergence. Our structure-based functional analysis suggests that, like SV5-V, HBx captures DDB1 to redirect the ubiquitin ligase activity of the CUL4-DDB1 E3 ligase. We also identify the alpha-helical motif shared by these viral proteins in the cellular substrate-recruiting subunits of the E3 complex, the DDB1-CUL4-associated factors (DCAFs) that are functionally mimicked by the viral hijackers. Together, our studies reveal a common yet promiscuous structural element that is important for the assembly of cellular and virally hijacked CUL4-DDB1 E3 complexes.

Indexed as

Models, MolecularProtein Structure, SecondaryBlotting, WesternColony-Forming Units AssayCrystallizationCullin ProteinsDNA-Binding ProteinsGreen Fluorescent ProteinsHeLa CellsHumansImmunoprecipitationLuciferasesProtein BindingTrans-ActivatorsTwo-Hybrid System TechniquesUbiquitin-Protein LigasesCUL4A protein, humanCullin ProteinsDDB1 protein, humanDNA-Binding ProteinsGreen Fluorescent Proteinshepatitis B virus X proteinLuciferasesTrans-ActivatorsUbiquitin-Protein LigasesViral Regulatory and Accessory Proteins

Identifiers

PMID19966799
PMCPMC2823288
OpenAlexW2069841786

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.