Evidence map›Paper›PMID 19966273›Full record

ArticleNucleic acids research2010

The transcriptional transactivator Tat selectively regulates viral splicing.

Joseph A Jablonski, Antonio L Amelio, Mauro Giacca, Massimo Caputi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 51 citations in OpenAlex.

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  8. HibeRNAtion: HIV-1 RNA Metabolism and Viral Latency.Frontiers in cellular and infection microbiology · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Joseph A JablonskiBasic Science Department, Florida Atlantic University, Boca Raton, FL 33431, USA.
Antonio L Amelio
Mauro Giacca
Massimo Caputi
Scripps Research Institute · USFlorida Atlantic University · US

Funding

Regulation of HIV-1 RNA ProcessingR01AI052820 · NIAID · JOHNS HOPKINS UNIVERSITY · PI CAPUTI, MASSIMO · 2003 to 2007
$1.5M
Characterizing the Role of MYC-MAX Complexes in TORC1/MAML2-mediated OncogenesisF32CA134121 · NCI · SCRIPPS FLORIDA · PI AMELIO, ANTONIO LUIGI · 2008 to 2010
$155k
NCI NIH HHS CA134121NCI NIH HHS F32 CA134121NIAID NIH HHS R01AI052820
6 · The paper itself

Abstract

HIV-1 gene expression requires both viral and cellular factors to control and coordinate transcription. While the viral factor Tat is known for its transcriptional transactivator properties, we present evidence for an unexpected function of Tat in viral splicing regulation. We used a series of HIV-1 reporter minigenes to demonstrate that Tat's role in splicing is dependent on the cellular co-transcriptional splicing activators Tat-SF1 and CA150. Surprisingly, we show that this Tat-mediated splicing function is independent from transcriptional activation. In the context of the full-length viral genome, this mechanism promotes an autoregulatory feedback that decreases expression of tat and favors expression of the env-specific mRNA. Our data demonstrate that Tat-mediated regulation of transcription and splicing can be uncoupled and suggest a mechanism for the involvement of specific transcriptional activators in splicing.

Indexed as

Alternative SplicingCell Lineenv Gene Products, Human Immunodeficiency VirusGene Expression Regulation, ViralHIV-1Humansnef Gene Products, Human Immunodeficiency Virusrev Gene Products, Human Immunodeficiency VirusRNA Polymerase IIRNA Splice Sitestat Gene Products, Human Immunodeficiency VirusTrans-ActivatorsTranscriptional ActivationTranscriptional Elongation Factorsenv Gene Products, Human Immunodeficiency VirusHTATSF1 protein, humannef Gene Products, Human Immunodeficiency Virusrev Gene Products, Human Immunodeficiency Virusrev protein, Human Immunodeficiency Virus-1RNA Polymerase IIRNA Splice Sitestat Gene Products, Human Immunodeficiency VirusTCERG1 protein, humanTrans-ActivatorsTranscriptional Elongation Factors

Identifiers

PMID19966273
PMCPMC2831323
OpenAlexW1984421295

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.