Evidence map›Paper›PMID 19965620›Full record

ArticleBlood2010

Gene expression profiling identifies emerging oncogenic pathways operating in extranodal NK/T-cell lymphoma, nasal type.

Yenlin Huang, Aurélien de Reyniès, Laurence de Leval, Bouchra Ghazi, Nadine Martin-Garcia, Marion Travert, Jacques Bosq, Josette Brière, Barbara Petit, Emilie Thomas and 6 more

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Blood, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02431403 (Open-labeled, Multicenter, Phase I/II Study of Imatinib Combined With ESHAP as Salvage Therapy in Relapsed/Refractory Non-Hodgkin's Lymphoma), which is not on this map. Cited by 150 papers.

0numbers the graph read from it
0cells of the map it votes in
150citing papers in PubMed
13.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02431403 phase1 / phase2unknown statusnot on this mapstarted 2015, after this paper: background citation

Open-labeled, Multicenter, Phase I/II Study of Imatinib Combined With ESHAP as Salvage Therapy in Relapsed/Refractory Non-Hodgkin's Lymphoma

TypeinterventionalSponsorPusan National University HospitalRan2015Enrolled94ConditionsLymphoma, Non-HodgkinArmsESHAP-Imatinib
3 · Its place in the literature

Who cites it

150 citing papers in PubMed, 308 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Trial
  4. Role of PRDM1 in natural killer cells.Molecular biology reports · 2026
    Review
  5. Review
  6. Article
  7. Gut-reproduction axis: genome-wide pleiotropic and prospective evidence linking inflammatory bowel disease with gynecological disorders.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2026
    Article
  8. Review
  9. Review
  10. Article
  11. The Significance of the Microenvironment in T/Nk-Cell Neoplasms.International journal of molecular sciences · 2025
    Review
  12. Article
  13. Review
  14. Mechanisms and Therapeutic Implications of EZH2 in Nasal Diseases.Clinical reviews in allergy & immunology · 2025
    Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article

90 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 10 institutions in 3 countries.

Yenlin HuangInserm U955, Créteil, France.
Aurélien de Reyniès
Laurence de Leval
Bouchra Ghazi
Nadine Martin-Garcia
Marion Travert
Jacques Bosq
Josette Brière
Barbara Petit
Emilie Thomas
Paul Coppo
Teresa Marafioti
Jean-François Emile
Marie-Hélène Delfau-Larue
Christian Schmitt
Philippe Gaulard
Assistance Publique – Hôpitaux de Paris · FRHôpital Saint-Louis · FRLa Ligue Contre le Cancer · FRHôpital Albert-Chenevier · FRHôpital Dupuytren · FRHôpital Saint-Antoine · FRInserm · FRInstitut Gustave Roussy · FRJohn Radcliffe Hospital · GBUniversity of Liège · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biopsies and cell lines of natural killer/T-cell lymphoma, nasal type (NKTCL) were subject to combined gene expression profiling and array-based comparative genomic hybridization analyses. Compared with peripheral T-cell lymphoma, not otherwise specified, NKTCL had greater transcript levels for NK-cell and cytotoxic molecules, especially granzyme H. Compared with normal NKcells, tumors were closer to activated than resting cells and overexpressed several genes related to vascular biology, Epstein-Barr Virus-induced genes, and PDGFRA. Notably, platelet-derived growth factor receptor alpha and its phosphorylated form were confirmed at the protein level, and in vitro the MEC04 NKTCL cell line was sensitive to imatinib. Deregulation of the AKT, Janus kinase-signal transducers and activators of transcription, and nuclear factor-kappaB pathways was corroborated by nuclear expression of phosphorylated AKT, signal transducers and activators of transcription 3, and RelA in NKTCL, and several deregulated genes in these pathways mapped to regions of recurrent copy number aberrations (AKT3 [1q44], IL6R [1q21.3], CCL2 [17q12], TNFRSF21 [6p12.3]). Several features of NKTCL uncovered by this analysis suggest perturbation of angiogenic pathways. Integrative analysis also evidenced deregulation of the tumor suppressor HACE1 in the frequently deleted 6q21 region. This study highlights emerging oncogenic pathways in NKTCL and identifies novel diagnostic and therapeutic targets.

Indexed as

Gene Expression ProfilingAdultAgedBiomarkers, TumorBlotting, WesternCell ProliferationCells, CulturedComparative Genomic HybridizationEpstein-Barr Virus InfectionsFemaleHerpesvirus 4, HumanHumansImmunoenzyme TechniquesKiller Cells, NaturalLymphoma, Extranodal NK-T-CellMaleBiomarkers, TumorHACE1 protein, humanReceptors, Platelet-Derived Growth FactorRNA, MessengerUbiquitin-Protein Ligases

Identifiers

PMID19965620
PMCPMC2826234
OpenAlexW2091572955

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.