Evidence map›Paper›PMID 19961857›Full record

ArticleJournal of molecular biology2010

Crystal structure of CYP24A1, a mitochondrial cytochrome P450 involved in vitamin D metabolism.

Andrew J Annalora, David B Goodin, Wen-Xu Hong, Qinghai Zhang, Eric F Johnson, C David Stout

Abstract read
In one paragraph

Article in Journal of molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 1 pooled it
9.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 1 synthesis or guideline pooled it, 175 citations in OpenAlex.

  1. Pooled it
  2. Characterization of a CYP107 family vitamin DArchives of biochemistry and biophysics · 2026
    Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Animals : an open access journal from MDPI · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. The α- and β-Subunit Boundary at the Stem of the Mushroom-Like αApplied and environmental microbiology · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Andrew J AnnaloraDepartment of Molecular Biology, The Scripps Research Institute, La Jolla, CA 92037, USA. annalora@scripps.edu
David B Goodin
Wen-Xu Hong
Qinghai Zhang
Eric F Johnson
C David Stout
Scripps Research Institute · US

Funding

JCSG Center:Innovative Membrane Protein Technology (RMI)P50GM073197 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI STEVENS, RAYMOND C · 2004 to 2013
$26.8M
CYTOCHROME P450 POLYMORPHISMR01GM031001 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI JOHNSON, ERIC F · 1985 to 2022
$16.2M
NOVEL SUBSTRATE OXIDATION BY ENZYME ENGINEERINGR01GM041049 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GOODIN, DAVID B. · 1994 to 2014
$3.6M
Novel Substrate Oxidation by Enzyme EngineeringR37GM041049 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI GOODIN, DAVID B. · 2006 to 2010
$2.1M
DETERMINANTS OF FUNCTIONAL DIVERSITY IN HEME ENZYMESR29GM041049 · NIGMS · SCRIPPS RESEARCH INSTITUTE · PI GOODIN, DAVID B. · 1989 to 1993
–
NIGMS NIH HHS GM031001NIGMS NIH HHS GM073197NIGMS NIH HHS GM41049NIGMS NIH HHS P50 GM073197NIGMS NIH HHS R01 GM031001NIGMS NIH HHS R01 GM041049NIGMS NIH HHS R37 GM041049
6 · The paper itself

Abstract

Cytochrome P450 (CYP) 24A1 catalyzes the side-chain oxidation of the hormonal form of vitamin D. Expression of CYP24A1 is up-regulated to attenuate vitamin D signaling associated with calcium homeostasis and cellular growth processes. The development of therapeutics for disorders linked to vitamin D insufficiency would be greatly facilitated by structural knowledge of CYP24A1. Here, we report the crystal structure of rat CYP24A1 at 2.5 A resolution. The structure exhibits an open cleft leading to the active-site heme prosthetic group on the distal surface that is likely to define the path of substrate access into the active site. The entrance to the cleft is flanked by conserved hydrophobic residues on helices A' and G', suggesting a mode of insertion into the inner mitochondrial membrane. A docking model for 1alpha,25-dihydroxyvitamin D(3) binding in the open form of CYP24A1 that clarifies the structural determinants of secosteroid recognition and validates the predictive power of existing homology models of CYP24A1 is proposed. Analysis of CYP24A1's proximal surface identifies the determinants of adrenodoxin recognition as a constellation of conserved residues from helices K, K'', and L that converge with an adjacent lysine-rich loop for binding the redox protein. Overall, the CYP24A1 structure provides the first template for understanding membrane insertion, substrate binding, and redox partner interaction in mitochondrial P450s.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCrystallography, X-RayCytochrome P-450 Enzyme SystemMitochondriaModels, MolecularMolecular Sequence DataProtein BindingProtein ConformationRatsSecosteroidsSequence Homology, Amino AcidSteroid HydroxylasesVitamin DVitamin D3 24-HydroxylaseCyp24a1 protein, ratCytochrome P-450 Enzyme SystemSecosteroidsSteroid HydroxylasesVitamin DVitamin D3 24-Hydroxylase

Identifiers

PMID19961857
PMCPMC2830900
OpenAlexW1975264032

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.