Evidence map›Paper›PMID 19960508›Full record

ArticleJournal of cellular biochemistry2010

PcG recruitment by the YY1 REPO domain can be mediated by Yaf2.

Frank Wilkinson, Heather Pratt, Michael L Atchison

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cellular biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Yin Yang 1: Function, Mechanisms, and Glia.Neurochemical research · 2025
    Review
  7. Article
  8. Review
  9. The Role of Polycomb Group Protein BMI1 in DNA Repair and Genomic Stability.International journal of molecular sciences · 2021
    Review
  10. Review
  11. Review
  12. The Why of YY1: Mechanisms of Transcriptional Regulation by Yin Yang 1.Frontiers in cell and developmental biology · 2020
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Yin Yang 1 promotes mTORC2-mediated AKT phosphorylation.Journal of molecular cell biology · 2016
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Frank WilkinsonSchool of Science and Health, Philadelphia University, Schoolhouse Lane and Henry Avenue, Philadelphia, Pennsylvania 19144, USA. wilkinsonf@philau.edu
Heather Pratt
Michael L Atchison
Philadelphia University · USUniversity of Pennsylvania · US

Funding

Control of B cell Development by YY1R01AI079002 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL LEE · 2010 to 2020
$4.3M
PcG Function of YY1 in Transcription and DevelopmentR01GM071830 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL LEE · 2006 to 2010
$1.3M
Developmental Control of Enhancer FunctionR01GM082841 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ATCHISON, MICHAEL LEE · 2010 to 2013
$1.2M
NIAID NIH HHS R01 AI079002NIGMS NIH HHS R01 GM071830NIGMS NIH HHS R01 GM082841
6 · The paper itself

Abstract

The Polycomb Group (PcG) complex of transcriptional repressors is critical for the maintenance of stage-specific developmental gene expression, stem cell maintenance and for large-scale chromosomal dynamics. Functional deficiency of a single PcG gene can severely compromise PcG function, leading to developmental defects, embryonic lethality, or a number of malignancies. Despite the critical nature of PcG proteins, the mechanisms by which these complexes mediate their effects are relatively uncharacterized. Nearly all vertebrate PcG proteins lack inherent DNA binding capacity, making it unclear how they are targeted to Polycomb response element (PRE) sequences. Transcription factor YY1 is a functional ortholog of a Drosophila PcG protein, Pleiohomeotic (PHO), one of the few PcG proteins with specific DNA binding capability, and YY1 can recruit PcG proteins to specific DNA sequences. A small 25 amino acid YY1 domain (the REPO domain) is necessary and sufficient for recruitment of PcG proteins to DNA and for transcriptional repression. We show here that the YY1 REPO domain interacts with PcG protein Yaf2 and recruits Yaf2 to DNA. Interaction is lost when the YY1 REPO domain is deleted. In addition we show that Yaf2, when linked to a heterologous DNA binding domain, can recruit PcG proteins to DNA leading to transcriptional repression. When the Drosophila homolog of Yaf2 (dRYBP) is mutated, PcG recruitment to DNA is reduced. Taken together, our results suggest that Yaf2 serves as a molecular bridge between YY1 and other PcG complex proteins.

Indexed as

AnimalsBinding SitesDNADrosophila melanogasterDrosophila ProteinsPolycomb-Group ProteinsPolycomb Repressive Complex 1Protein Structure, TertiaryRepressor ProteinsResponse ElementsYY1 Transcription FactorDNADrosophila ProteinsPc protein, DrosophilaPolycomb-Group ProteinsPolycomb Repressive Complex 1Repressor ProteinsRYBP protein, DrosophilaYY1 Transcription Factor

Identifiers

PMID19960508
PMCPMC3677512
OpenAlexW2161542837

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.