Evidence map›Paper›PMID 19959576›Full record

ArticleMicrobiology (Reading, England)2010

Phosphoribosylpyrophosphate synthetase (PrsA) variants alter cellular pools of ribose 5-phosphate and influence thiamine synthesis in Salmonella enterica.

Mark J Koenigsknecht, Luke A Fenlon, Diana M Downs

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mark J KoenigsknechtDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Luke A FenlonDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
Diana M DownsDepartment of Bacteriology, University of Wisconsin-Madison, Madison, WI 53706, USA.
University of Wisconsin–Madison · US

Funding

NOVEL SYNTHETIC PATHWAY FOR THE PYRIMIDINE OF THIAMINER01GM047296 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DOWNS, DIANA M. · 1993 to 2010
$3.1M
NIGMS NIH HHS GM47296NIGMS NIH HHS R01 GM047296
6 · The paper itself

Abstract

Phosphoribosylamine (PRA) is the first intermediate in the common purine/thiamine biosynthetic pathway and is primarily synthesized by the product of the purF gene, glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase (E.C. 2.4.2.14). Past genetic and biochemical studies have shown that multiple mechanisms for the synthesis of PRA independent of PurF are present in Salmonella enterica. Here, we describe mutant alleles of the essential prsA gene, which encodes PRPP synthetase (E.C. 2.7.6.1), that allow PurF-independent thiamine synthesis. The mutant alleles resulted in reduced PrsA activity in extracts, caused nutritional requirements indicative of PRPP limitation and allowed non-enzymic formation of PRA due to a build-up of ribose 5-phosphate (R5P). These results emphasize the balance that must be reached between pathways competing for the same substrate to maintain robustness of the metabolic network.

Indexed as

AllelesBacterial ProteinsCulture MediaLipoproteinsMembrane ProteinsMetabolic Networks and PathwaysMutationRibosemonophosphatesSalmonella entericaThiamineTransaminasesBacterial ProteinsCulture MediaLipoproteinsMembrane Proteinsphosphoribosylaminephosphoribosyl pyrophosphate aminotransferaseprsA protein, bacteriaribose-5-phosphateRibosemonophosphatesThiamineTransaminases

Identifiers

PMID19959576
PMCPMC2889433
OpenAlexW2097682875

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.