Evidence map›Paper›PMID 19959365›Full record

ReviewTrends in biochemical sciences2010

Role of RNA structure in regulating pre-mRNA splicing.

M Bryan Warf, J Andrew Berglund

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 188 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
188citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

188 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Review
  3. Article
  4. Review
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  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Targeted RNA Degradation as a Promising Therapeutic Strategy.International journal of molecular sciences · 2025
    Review
  12. CAR-SPLASH identifies nascent pre-mRNA structures implicated in kinetic coupling and alternative splicing.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Identification of a newMolecular genetics and metabolism reports · 2025
    Article
  20. Article

128 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

M Bryan WarfInstitute of Molecular Biology, and Department of Chemistry, University of Oregon, Eugene, Oregon 97403, USA.
J Andrew Berglund

Funding

Molecular Mechanisms of Myotonic DystrophyR01AR053903 · NIAMS · UNIVERSITY OF OREGON · PI BERGLUND, ANDREW · 2006 to 2010
$1.3M
NIAMS NIH HHS AR053903NIAMS NIH HHS R01 AR053903
6 · The paper itself

Abstract

Pre-mRNA splicing involves removing non-coding introns from RNA transcripts. It is carried out by the spliceosome, along with other auxiliary factors. In general, research in splicing has focused on the sequences within the pre-mRNA, without considering the structures that these sequences might form. We propose that the role of RNA structure deserves more consideration when thinking about splicing mechanisms. RNA structures can inhibit or aid binding of spliceosomal components to the pre-mRNA, or can increase splicing efficiency by bringing important sequences into close proximity. Recent reports have identified proteins and small molecules that can regulate splicing by modulating RNA structures, thereby expanding our knowledge of the mechanisms used to regulate splicing.

Indexed as

Nucleic Acid ConformationRNA SplicingAnimalsBase SequenceExonsHumansIntronsMolecular Sequence DataRNARNA PrecursorsRNARNA Precursors

Identifiers

PMID19959365
PMCPMC2834840

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.