Evidence map›Paper›PMID 19958391›Full record

ArticleGenes, brain, and behavior2010

High-throughput behavioral phenotyping in the expanded panel of BXD recombinant inbred strains.

V M Philip, S Duvvuru, B Gomero, T A Ansah, C D Blaha, M N Cook, K M Hamre, W R Lariviere, D B Matthews, G Mittleman and 2 more

Abstract read
In one paragraph

Article in Genes, brain, and behavior, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 135 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
135citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

135 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. High-Fat Diet Alters Behavior and Hippocampal Gene Expression.International journal of molecular sciences · 2025
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  10. Adaptations in glutathione-based redox protein signaling pathways and alcohol drinking across species.Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie · 2024
    Article
  11. Identification of novel genetic loci and candidate genes for progressive ethanol consumption in diversity outbred mice.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2024
    Article
  12. Article
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  14. Article
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75 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

V M PhilipSystems Genetics Group, Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA.
S Duvvuru
B Gomero
T A Ansah
C D Blaha
M N Cook
K M Hamre
W R Lariviere
D B Matthews
G Mittleman
D Goldowitz
E J Chesler

Funding

Systems Genetics of Alcohol Response and Stress Effects in CNSU01AA013499 · NIAAA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI WILLIAMS, ROBERT W. · 2002 to 2016
$4.8M
INIA-STRESS: Informatics and Analysis CoreU01AA016662 · NIAAA · VIRGINIA COMMONWEALTH UNIVERSITY · PI WILLIAMS, ROBERT W. · 2007 to 2016
$2.9M
Gene to Phenotype Networks for Alcohol & Drug AddictionR01DA020677 · NIDA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI GOLDOWITZ, DANIEL · 2006 to 2008
$2.2M
GENETICS OF NEUROPATHIC & INFLAMMATORY HYPERSENSITIVITYR01DA021198 · NIDA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LARIVIERE, WILLIAM ROGER · 2007 to 2011
$1.7M
INIA: System Mechanisms in Stress-Alcohol InteractionsU01AA013509 · NIAAA · UNIVERSITY OF MEMPHIS · PI MATTHEWS, DOUGLAS B · 2002 to 2006
$1.4M
Ontological Discovery for Ethanol ResearchU01AA016669 · NIAAA · UT-BATTELLE, LLC-OAK RIDGE NATIONAL LAB · PI CHESLER, ELISSA J · 2007 to 2009
$525k
NIAAA NIH HHS AA016662NIAAA NIH HHS AA13499NIAAA NIH HHS AA13509NIAAA NIH HHS U01 AA013499NIAAA NIH HHS U01 AA013509NIAAA NIH HHS U01 AA016662NIAAA NIH HHS U01 AA016669NIDA NIH HHS DA020677NIDA NIH HHS DA021198NIDA NIH HHS R01 DA020677NIDA NIH HHS R01 DA021198
6 · The paper itself

Abstract

Genetic reference populations, particularly the BXD recombinant inbred (BXD RI) strains derived from C57BL/6J and DBA/2J mice, are a valuable resource for the discovery of the bio-molecular substrates and genetic drivers responsible for trait variation and covariation. This approach can be profitably applied in the analysis of susceptibility and mechanisms of drug and alcohol use disorders for which many predisposing behaviors may predict the occurrence and manifestation of increased preference for these substances. Many of these traits are modeled by common mouse behavioral assays, facilitating the detection of patterns and sources of genetic coregulation of predisposing phenotypes and substance consumption. Members of the Tennessee Mouse Genome Consortium (TMGC) have obtained phenotype data from over 250 measures related to multiple behavioral assays across several batteries: response to, and withdrawal from cocaine, 3,4-methylenedioxymethamphetamine; "ecstasy" (MDMA), morphine and alcohol; novelty seeking; behavioral despair and related neurological phenomena; pain sensitivity; stress sensitivity; anxiety; hyperactivity and sleep/wake cycles. All traits have been measured in both sexes in approximately 70 strains of the recently expanded panel of BXD RI strains. Sex differences and heritability estimates were obtained for each trait, and a comparison of early (N = 32) and recent (N = 37) BXD RI lines was performed. Primary data are publicly available for heritability, sex difference and genetic analyses using the MouseTrack database, and are also available in GeneNetwork.org for quantitative trait locus (QTL) detection and genetic analysis of gene expression. Together with the results of related studies, these data form a public resource for integrative systems genetic analysis of neurobehavioral traits.

Indexed as

Recombination, GeneticAlcohol DrinkingAnimalsBehavior, AnimalBody WeightCocaine-Related DisordersHabituation, PsychophysiologicHandling, PsychologicalHousing, AnimalMiceMice, Inbred C57BLMice, Inbred DBAMorphine DependenceOrgan SizePhenotypeRNA, MessengerRNA, Messenger

Identifiers

PMID19958391
PMCPMC2855868

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.