Evidence map›Paper›PMID 19957376›Full record

ArticleHepatology (Baltimore, Md.)2010

Epigenetic regulation of hepatic endoplasmic reticulum stress pathways in the ethanol-fed cystathionine beta synthase-deficient mouse.

Farah Esfandiari, Valentina Medici, Donna H Wong, Soumia Jose, Maryam Dolatshahi, Eoin Quinlivan, Sanjana Dayal, Steven R Lentz, Hidekazu Tsukamoto, Yue Hua Zhang and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 81 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Alcohol effects on hepatic lipid metabolism.Journal of lipid research · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. New therapeutic targets in alcoholic hepatitis.Hepatology international · 2016
    Review
  17. Role of glucose-regulated protein 78 in early brain injury after experimental subarachnoid hemorrhage in rats.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2016
    Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Farah EsfandiariDepartment of Internal Medicine, 5303 Genome and Biomedical Science Facility, 451 E Health Sciences Drive, University of California, Davis, Davis, CA 95616, USA. fesfandiari@ucdavis.edu
Valentina Medici
Donna H Wong
Soumia Jose
Maryam Dolatshahi
Eoin Quinlivan
Sanjana Dayal
Steven R Lentz
Hidekazu Tsukamoto
Yue Hua Zhang
Samuel W French
Charles H Halsted
University of California, Davis · USUCLA Medical Center · USUniversity of Iowa · USUniversity of Florida · USVA Greater Los Angeles Healthcare System · US

Funding

The Southernearch Center for ALPD and CirrhosisP50AA011999 · NIAAA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ANNA S. GUKOVSKAYA · 1999 to 2026
$45.8M
Transgenic and knockout animalP01NS024621 · NINDS · UNIVERSITY OF IOWA · PI SANFORD, L PHILLIP · 1987 to 2012
$14.9M
ETHANOL REGULATION OF ADIPONECTIN AND ITS SIGNALINGR01AA015951 · NIAAA · UNIVERSITY OF SOUTH FLORIDA · PI FERRELL, JESSICA MARIE · 2006 to 2022
$5.0M
Effects of ethanol on lipid metabolismR01AA013623 · NIAAA · UNIVERSITY OF SOUTH FLORIDA · PI LEE, YOON-KWANG · 2003 to 2018
$4.6M
Vascular Mechanisms in Homocysteinemia and AtherosclerosisR01HL063943 · NHLBI · UNIVERSITY OF IOWA · PI LENTZ, STEVEN R · 2000 to 2012
$4.0M
PATHOGENESIS OF EXPERIMENTAL ALCOHOLIC LIVER DISEASER01AA008116 · NIAAA · UNIVERSITY OF OTTAWA · PI FRENCH, SAMUEL WILLIAM · 1990 to 2010
$2.9M
SAMe and Folate Deficiency in Alcoholic MircropigsR01AA014145 · NIAAA · UNIVERSITY OF CALIFORNIA DAVIS · PI HALSTED, CHARLES HOPKINSON · 2003 to 2006
$1.3M
NHLBI NIH HHS R01 HL063943NIAAA NIH HHS P50 AA011999NIAAA NIH HHS P50AA11999NIAAA NIH HHS R01 AA008116NIAAA NIH HHS R01 AA013623NIAAA NIH HHS R01AA013623NIAAA NIH HHS R01 AA014145NIAAA NIH HHS R01 AA015951NIAAA NIH HHS R0-1 AA08116NIAAA NIH HHS R01 AA 14145NINDS NIH HHS P01 NS024621
6 · The paper itself

Abstract

unlabelledWe tested the hypothesis that the pathogenesis of alcoholic liver injury is mediated by epigenetic changes in regulatory genes that result from the induction of aberrant methionine metabolism by ethanol feeding. Five-month-old cystathionine beta synthase heterozygous and wild-type C57BL/6J littermate mice were fed liquid control or ethanol diets by intragastric infusion for 4 weeks. Both ethanol-fed groups showed typical histopathology of alcoholic steatohepatitis, with reduction in liver S-adenosylmethionine (SAM), elevation in liver S-adenosylhomocysteine (SAH), and reduction in the SAM/SAH ratio with interactions of ethanol and genotype effects. Hepatic endoplasmic reticulum stress signals including glucose-regulated protein-78 (GRP78), activating transcription factor 4, growth arrest and DNA damage-inducible gene 153 (GADD153), caspase 12, and transcription factor sterol response element binding protein-1c (SREBP-1c) were up-regulated in ethanol-fed mice with genotype interactions and negative correlations with the SAM/SAH ratio. Immunohistochemical staining showed reduction in trimethylated histone H3 lysine-9 (3meH3K9) protein levels in centrilobular regions in both ethanol groups, with no changes in trimethylated histone H3 lysine-4 levels. The chromatin immunoprecipitation assay revealed a decrease in levels of suppressor chromatin marker 3meH3K9 in the promoter regions of GRP78, SREBP-1c, and GADD153 in ethanol-treated heterozygous cystathionine beta synthase mice. The messenger RNA expression of the histone H3K9 methyltransferase EHMT2 (G9a) was selectively decreased in ethanol-fed mice.

conclusionThe pathogenesis of alcoholic steatohepatitis is mediated in part through the effects of altered methionine metabolism on epigenetic regulation of pathways of endoplasmic reticulum stress relating to apoptosis and lipogenesis.

Indexed as

Epigenesis, GeneticAnimalsEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPEthanolFatty Liver, AlcoholicHomocystinuriaLiverMiceStress, PhysiologicalEndoplasmic Reticulum Chaperone BiPEthanolHspa5 protein, mouse

Identifiers

PMID19957376
PMCPMC2898175
OpenAlexW2076011117

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.