Evidence map›Paper›PMID 19956562›Full record

ArticleMolecular vision2009

Expression analysis of human pterygium shows a predominance of conjunctival and limbal markers and genes associated with cell migration.

C J Jaworski, M Aryankalayil-John, M M Campos, R N Fariss, J Rowsey, N Agarwalla, T W Reid, N Dushku, C A Cox, D Carper and 1 more

Open access · greenAbstract read
In one paragraph

Article in Molecular vision, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 48 citations in OpenAlex.

  1. Trial
  2. Therapeutic Potential of Graphene Quantum Dots on Pterygium Cells.Investigative ophthalmology & visual science · 2025
    Article
  3. Article
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  11. Phytochemical Profile and Antioxidant and Antiproliferative Activity ofEvidence-based complementary and alternative medicine : eCAM · 2021
    Article
  12. A human cell atlas of fetal gene expression.Science (New York, N.Y.) · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Expression and Localization of Glycosaminoglycans/Proteoglycan in Pterygium: An Immunohistochemical Study.Medical hypothesis, discovery & innovation ophthalmology journal · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Towards a more molecular taxonomy of disease.Journal of biomedical semantics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

C J JaworskiSection on Molecular Therapeutics, NEI/NIH, Bethesda, MD 20892, USA. Jaworski@helix.nih.gov
M Aryankalayil-John
M M Campos
R N Fariss
J Rowsey
N Agarwalla
T W Reid
N Dushku
C A Cox
D Carper
G Wistow
National Institutes of Health · US

Funding

Signaling in the retina and retinal pigment epitheliumZIAEY000444 · NEI · NATIONAL EYE INSTITUTE · PI REDMOND, T. MICHAEL · 2009 to 2025
$23.4M
Imaging Core UnitZICEY000459 · NEI · NATIONAL EYE INSTITUTE · PI FARISS, ROBERT · 2009 to 2025
$13.1M
NEIBank: Est Analysis And Bioinformatics For Ocular GenomicsZIAEY000320 · NEI · NATIONAL EYE INSTITUTE · PI WISTOW, GRAEME J · 2009 to 2023
$1.5M
6 · The paper itself

Abstract

purposePterygium is a vision-impairing fibrovascular lesion that grows across the corneal surface and is associated with sunlight exposure. To increase our understanding of the cells types involved in pterygium, we have used expressed sequence tag analysis to examine the transcriptional repertoire of isolated pterygium and to identify marker genes for tissue origin and cell migration.

methodsAn unnormalized unamplified cDNA library was prepared from 15 pooled specimens of surgically removed pterygia as part of the NEIBank project. Gene expression patterns were compared with existing data for human cornea, limbus, and conjunctiva, and expression of selected genes was verified by immunofluorescence localization in normal eye ocular surface and in pterygium.

resultsSequence analysis of 2,976 randomly selected clones produced over 1,800 unique clusters, potentially representing single genes. The most abundant complementary DNAs from pterygium include clusterin, keratins 13 (Krt13) and 4 (Krt4), S100A9/calgranulin B, and spermidine/spermine N1-acetyltransferase (SAT1). Markers for both conjunctiva (such as keratin 13/4 and AQP3) and corneal epithelium (such as keratin 12/3 and AQP5) were present. Immunofluorescence of Krt12 and 13 in the normal ocular surface showed specificity of Krt12 in cornea and Krt13 in conjunctival and limbal epithelia, with a fairly sharp boundary at the limbal-corneal border. In the pterygium there was a patchy distribution of both Krt12 and 13 up to a normal corneal epithelial region specific for Krt12. Immunoglobulins were also among the prominently expressed transcripts. Several of the genes expressed most abundantly in excised pterygium, particularly S100A9 and SAT1, have roles in cell migration. SAT1 exerts its effects through control of polyamine levels. IPENSpm, a polyamine analogue, showed a significant ability to reduce migration in primary cultures of pterygium. A number of genes highly expressed in cornea were not found in pterygium (several small leucine-rich proteoglycan family members) or were expressed at considerably lower levels (ALDH3A1 and decorin).

conclusionsThe expression pattern of keratins and other markers in pterygium most closely resemble those of conjunctival and limbal cells; some corneal markers are present, notably Krt12, but at lower levels than equivalent conjunctival markers. Our data are consistent with the model of pterygium developing from the migration of conjunctival- and limbal-like cells into corneal epithelium. Identification of genes with roles in cell migration suggests potential therapeutic targets. In particular, the ability of polyamine analogues to reduce migration in primary cultures of pterygium presents a possible approach to slowing pterygium growth.

Indexed as

Gene Expression ProfilingBiomarkersCell MovementCells, CulturedClusterinConjunctivaCorneaDown-RegulationEye ProteinsFluorescent Antibody TechniqueGene LibraryGene Regulatory NetworksHumansKeratinsLimbus CorneaePolyaminesBiomarkersClusterinEye ProteinsKeratinsPolyaminesRNA, Messenger

Identifiers

PMID19956562
PMCPMC2785720
OpenAlexW2104609067

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.