Evidence map›Paper›PMID 19956560›Full record

ArticleMolecular vision2009

Structure/function studies of dogfish alpha-crystallin, comparison with bovine alpha-crystallin.

A Ghahghaei, A Rekas, J A Carver, R C Augusteyn

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular vision, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Recombination and identification of human alpha B-crystallin.International journal of ophthalmology · 2018
    Article
  3. Article
  4. C-terminal interactions mediate the quaternary dynamics of αB-crystallin.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

A GhahghaeiBiology Department, University of Sistan and Baluchestan, Zahedan, Iran.
A Rekas
J A Carver
R C Augusteyn
University of Sistan and Baluchestan · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposealpha-Crystallin is the major protein of the mammalian lens where it contributes to the refractive properties needed for vision and possibly to the stability of the tissue. The aim of this study was to determine whether the properties of alpha-crystallin have changed during the course of evolution.

methodsDogfish alpha-crystallin, which appeared over 420 million years ago, has been contrasted with bovine alpha-crystallin, which emerged around 160 million years later, by comparing their sizes, the microenvironments of their cysteine and tryptophan residues, their chaperone-like activities and the flexibility of their COOH-terminal extensions.

resultsDogfish alpha-crystallin consists of alphaA- and alphaB-polypeptides, in a 1:5 ratio, and has a molecular mass of around 400 kDa. By contrast, the bovine protein is around 600-800 kDa in mass and has a 3:1 subunit ratio. Cysteine residues in the proteins were equally accessible to reaction with 5,5'-dithiobis-(2-nitrobenzoic acid). Quenching of fluorescence with acrylamide indicated tryptophan residues in the two proteins were in similar environments. The chaperone activity of dogfish alpha-crystallin was comparable to that of bovine alpha-crystallin in preventing the heat-induced precipitation of beta(L)-crystallin but the dogfish protein was three times more effective at preventing insulin precipitation after reduction at 37 C. (1)H nuclear magnetic resonance spectroscopic studies showed that the last 17 amino acids of the dogfish alphaB polypeptide (V162-K178) have great conformational flexibility, are highly exposed to solvent and adopt little ordered conformation. This is comparable to, but slightly longer in length, than the COOH-terminal extension observed in mammalian alpha-crystallins.

conclusionsThe structure and properties of alpha-crystallin have changed relatively little during the evolutionary period from the emergence of sharks and mammals.

Indexed as

alpha-CrystallinsAmino AcidsAmino Acid SequenceAnimalsCattleCell ExtractsChemical FractionationDogfishFluorescenceHot TemperatureInsulinMagnetic Resonance SpectroscopyMolecular Sequence DataProtein DenaturationSulfhydryl CompoundsTryptophanalpha-CrystallinsAmino AcidsCell ExtractsInsulinSulfhydryl CompoundsTryptophan

Identifiers

PMID19956560
PMCPMC2785718
OpenAlexW2156697446

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.