Evidence map›Paper›PMID 19956388›Full record

ArticleTranslational oncology2009

Promoter Hypermethylation in Tumor Suppressing Genes p16 and FHIT and Their Relationship with Estrogen Receptor and Progesterone Receptor Status in Breast Cancer Patients from Northern India.

Mohammad Raish, Varinderpal S Dhillon, Arif Ahmad, Mushtaq Ahmad Ansari, Shahid Mudassar, Mohammad Shahid, Vineeta Batra, Pawan Gupta, Bhudev Chandra Das, Nk Shukla and 1 more

Open access · goldAbstract read
In one paragraph

Article in Translational oncology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Epigenetic Silencing ofIndian journal of surgical oncology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Mohammad RaishHuman Genetics Lab, Jamia Millia Islamia, New Delhi-110025, India.
Varinderpal S Dhillon
Arif Ahmad
Mushtaq Ahmad Ansari
Shahid Mudassar
Mohammad Shahid
Vineeta Batra
Pawan Gupta
Bhudev Chandra Das
Nk Shukla
Syed Akhtar Husain
Jamia Millia Islamia · INCancer Hospital and Research Institute · INCommonwealth Scientific and Industrial Research Organisation · AUDR. B.R.A. Institute Rotary Cancer Hospital · INGovind Ballabh Pant Hospital · INInstitute of Cytology and Preventive Oncology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAberrant DNA methylation has been recognized in human breast carcinogenesis as a common molecular alteration associated with the loss of expression of a number of key regulatory genes. The present study was undertaken to determine whether methylation and expression of p16 and FHIT genes would correlate with the estrogen receptor (ER) and progesterone receptor (PR) status.

methodsMethylation-specific polymerase chain reaction, messenger RNA (mRNA) expression analysis, immunohistochemistry, and Western blot analysis were performed to study the methylation of p16 and FHIT genes in 351 pairs of malignant/normal breast tissues. We examined the expression of ER and PR in those specimens by immunohistochemistry. Mutations of p16 and FHIT genes in tumors were detected by direct sequencing.

resultsThe frequency of hypermethylation was 31.9% and 36.8% in p16 and FHIT genes, respectively, and showed significant harmony in concordant hypermethylation (P < .0001). In postmenopausal patients, methylation frequency in both genes is significantly higher in poorly and moderately differentiated tumors. Loss of protein expression of p16 and FHIT in 77 and 74 tumors, respectively, is associated with their methylation status in premenopausal women.

conclusionWe did not find any significant differences in tumor-related gene methylation patterns relevant to both ER and PR status of breast tumors.

Identifiers

PMID19956388
PMCPMC2781065
OpenAlexW148150671

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.