Evidence map›Paper›PMID 19954227›Full record

ArticleJournal of proteome research2010

Quantitative organellar proteomics analysis of rough endoplasmic reticulum from normal and acute pancreatitis rat pancreas.

Xuequn Chen, Maria Dolors Sans, John R Strahler, Alla Karnovsky, Stephen A Ernst, George Michailidis, Philip C Andrews, John A Williams

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

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  9. Embryonic lethal abnormal vision proteins and adenine and uridine-rich element mRNAs after global cerebral ischemia and reperfusion in the rat.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2017
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  14. The ryanodine receptor is expressed in human pancreatic acinar cells and contributes to acinar cell injury.American journal of physiology. Gastrointestinal and liver physiology · 2014
    Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Xuequn ChenDepartments of Molecular & Integrative Physiology, The University of Michigan, Ann Arbor, Michigan 48109, USA. xuequnc@umich.edu
Maria Dolors Sans
John R Strahler
Alla Karnovsky
Stephen A Ernst
George Michailidis
Philip C Andrews
John A Williams
University of Michigan–Ann Arbor · US

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OMARY, BISHR · 1986 to 2021
$22.5M
UNDERSTANDING THE PATHOGENESIS OF CAMPYLOBACTER JEJUNIP41RR018627 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FINLEY, RUSSELL L · 2003 to 2007
$12.4M
Calcium and Pancreatic Stimulus-Secretion CouplingR37DK041122 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WILLIAMS, JOHN A · 2006 to 2015
$3.2M
NCRR NIH HHS P41 RR018627NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P30 DK34933NIDDK NIH HHS R37 DK041122NIDDK NIH HHS R37 DK41122
6 · The paper itself

Abstract

The rough endoplasmic reticulum (RER) is a central organelle for synthesizing and processing digestive enzymes and alteration of ER functions may participate in the pathogenesis of acute pancreatitis (AP). To comprehensively characterize the normal and diseased RER subproteome, this study quantitatively compared the protein compositions of pancreatic RER between normal and AP animals using isobaric tags (iTRAQ) and 2D LC-MALDI-MS/MS. A total of 469 unique proteins were revealed from four independent experiments using two different AP models. These proteins belong to a large number of functional categories including ribosomal proteins, translocon subunits, chaperones, secretory proteins, and glyco- and lipid-processing enzymes. A total of 37 RER proteins (25 unique in arginine-induced, 6 unique in caerulein-induced and 6 common in both models of AP) showed significant changes during AP including translational regulators and digestive enzymes, whereas only mild changes were found in some ER chaperones. The six proteins common to both AP models included a decrease in pancreatic triacylglycerol lipase precursor, Erp27, and prolyl 4-hydroxylase beta polypeptide as well as a dramatic increase in fibrinogen alpha, beta and gamma chains. These results suggest that the early stages of AP involve changes of multiple RER proteins that may affect the synthesis and processing of digestive enzymes.

Indexed as

ProteomicsAcute DiseaseAnimalsChromatography, LiquidEndoplasmic ReticulumImmunohistochemistryPancreasPancreatitisRatsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationTandem Mass Spectrometry

Identifiers

PMID19954227
PMCPMC2818835
OpenAlexW2068157403

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.