Evidence map›Paper›PMID 19953086›Full record

ArticleMolecular systems biology2009

Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor.

Harish Shankaran, Danielle L Ippolito, William B Chrisler, Haluk Resat, Nikki Bollinger, Lee K Opresko, H Steven Wiley

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed
8.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 243 citations in OpenAlex.

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  10. Antigen perception in T cells by long-term Erk and NFAT signaling dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  17. Dynamics and Sensitivity of Signaling Pathways.Current pathobiology reports · 2022
    Article
  18. Review
  19. Article
  20. Article

72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Harish ShankaranSystems Biology Program, Pacific Northwest National Laboratory, Richland, WA, USA.
Danielle L Ippolito
William B Chrisler
Haluk Resat
Nikki Bollinger
Lee K Opresko
H Steven Wiley
Pacific Northwest National Laboratory · USEnvironmental Molecular Sciences Laboratory · US

Funding

Modeling Cell Receptor Signaling PathwaysR01GM072821 · NIGMS · WASHINGTON STATE UNIVERSITY · PI RESAT, HALUK · 2005 to 2012
$2.1M
NIGMS NIH HHS 5R01GM072821-03NIGMS NIH HHS R01 GM072821
6 · The paper itself

Abstract

Although the ERK pathway has a central role in the response of cells to growth factors, its regulatory structure and dynamics are incompletely understood. To investigate ERK activation in real time, we expressed an ERK-GFP fusion protein in human mammary epithelial cells. On EGF stimulation, we observed sustained oscillations of the ERK-GFP fusion protein between the nucleus and cytoplasm with a periodicity of approximately 15 min. The oscillations were persistent (>45 cycles), independent of cell cycle phase, and were highly dependent on cell density, essentially disappearing at confluency. Oscillations occurred even at ligand doses that elicited very low levels of ERK phosphorylation, and could be detected biochemically in both transfected and nontransfected cells. Mathematical modeling revealed that negative feedback from phosphorylated ERK to the cascade input was necessary to match the robustness of the oscillation characteristics observed over a broad range of ligand concentrations. Our characterization of single-cell ERK dynamics provides a quantitative foundation for understanding the regulatory structure of this signaling cascade.

Indexed as

Biological ClocksCell NucleusCells, CulturedCytoplasmEpidermal Growth FactorEpithelial CellsExtracellular Signal-Regulated MAP KinasesHumansPhosphorylationSignal TransductionEpidermal Growth FactorExtracellular Signal-Regulated MAP Kinases

Identifiers

PMID19953086
PMCPMC2824491
OpenAlexW2142362541

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.