Evidence map›Paper›PMID 19952280›Full record

ArticlePhysiological genomics2010

Genomic analysis distinguishes phases of early development of the mouse atrio-ventricular canal.

Pavle Vrljicak, Alex C Y Chang, Olena Morozova, Elizabeth D Wederell, Kyle Niessen, Marco A Marra, Aly Karsan, Pamela A Hoodless

Open access · greenAbstract read
In one paragraph

Article in Physiological genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Transforming Growth Factor Beta3 is Required for Cardiovascular Development.Journal of cardiovascular development and disease · 2020
    Article
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Review
  8. Transforming growth factor Beta2 is required for valve remodeling during heart development.Developmental dynamics : an official publication of the American Association of Anatomists · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Pavle VrljicakTerry Fox Laboratory, British Columbia Cancer Agency, Vancouver, British Columbia, Canada V5Z 1L3.
Alex C Y Chang
Olena Morozova
Elizabeth D Wederell
Kyle Niessen
Marco A Marra
Aly Karsan
Pamela A Hoodless
Terry Fox Research Institute · CABC Cancer Agency · CAUniversity of British Columbia · CA

Funding

Canadian Institutes of Health Research MOP-64354
6 · The paper itself

Abstract

Valve formation during embryonic heart development involves a complex interplay of regional specification, cell transformations, and remodeling events. While many studies have addressed the role of specific genes during this process, a global understanding of the genetic basis for the regional specification and development of the heart valves is incomplete. We have undertaken genome-wide transcriptional profiling of the developing heart valves in the mouse. Four Serial Analysis of Gene Expression libraries were generated and analyzed from the mouse atrio-ventricular canal (AVC) at embryonic days 9.5-12.5, covering the stages from initiation of endothelial to mesenchymal transition (EMT) through to the beginning of endocardial cushion remodeling. We identified 14 distinct temporal patterns of gene expression during AVC development. These were associated with specific functions and signaling pathway members. We defined the temporal distribution of mesenchyme genes during the EMT process and of specific Notch and transforming growth factor-beta targets. This work provides the first comprehensive temporal dataset during the formation of heart valves. These results identify molecular signatures that distinguish different phases of early heart valve formation allowing gene expression and function to be further investigated.

Indexed as

Gene Expression Regulation, DevelopmentalGenomeGenomicsAnimalsCell DifferentiationEmbryo, MammalianEndotheliumHeart ValvesMesodermMiceMice, Inbred C57BLReceptors, NotchTransforming Growth Factor betaReceptors, NotchTransforming Growth Factor beta

Identifiers

PMID19952280
PMCPMC2825764
OpenAlexW2035269984

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.