Evidence map›Paper›PMID 19952011›Full record

ArticleAnnals of botany2010

The AUX1 LAX family of auxin influx carriers is required for the establishment of embryonic root cell organization in Arabidopsis thaliana.

Yamel Ugartechea-Chirino, Ranjan Swarup, Kamal Swarup, Benjamin Péret, Morag Whitworth, Malcolm Bennett, Sue Bougourd

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 126 citations in OpenAlex.

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  12. Mitochondrial GPAT-derived LPA controls auxin-dependent embryonic and postembryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Article
  14. Regulatory Networks of Flowering Genes inPlants (Basel, Switzerland) · 2022
    Article
  15. Identification, Phylogenetic and Expression Analyses of theInternational journal of molecular sciences · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yamel Ugartechea-ChirinoDepartment of Biology, University of York, York YO10 5DD, UK. yamelu@ibt.unam.mx
Ranjan Swarup
Kamal Swarup
Benjamin Péret
Morag Whitworth
Malcolm Bennett
Sue Bougourd
University of Nottingham · GBUniversity of York · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D019613/1Biotechnology and Biological Sciences Research Council BB/G023972/1Biotechnology and Biological Sciences Research Council REI20541
6 · The paper itself

Abstract

BACKGROUND AND

aimsThe root meristem of the Arabidopsis thaliana mature embryo is a highly organized structure in which individual cell shape and size must be regulated in co-ordination with the surrounding cells. The objective of this study was to determine the role of the AUX1 LAX family of auxin import carriers during the establishment of the embryonic root cell pattern.

methodsThe radicle apex of single and multiple aux1 lax mutant mature embryos was used to evaluate the effect of this gene family upon embryonic root organization and root cap size, cell number and cell size. KEY

resultsIt was demonstrated here that mutations within the AUX1 LAX family are associated with changes in cell pattern establishment in the embryonic quiescent centre and columella. aux1 lax mutants have a larger radicle root cap than the wild type and this is associated with a significant increase in the root-cap cell number, average cell size, or both. Extreme disorganization of the radicle apex was observed among quadruple aux1 lax1 lax2 lax3 mutant embryos, but not in single aux1 null or in lax1, lax2 and lax3 single mutants, indicating redundancy within the AUX1 LAX family.

conclusionsIt was determined that the AUX1 LAX family of auxin influx facilitators participates in the establishment of cell pattern within the apex of the embryonic root in a gene-redundant fashion. It was demonstrated that aux1 lax mutants are affected in cell proliferation and cell growth within the radicle tip. Thus AUX1 LAX auxin importers emerge as new players in morphogenetic processes involved in patterning during embryonic root formation.

Indexed as

ArabidopsisArabidopsis ProteinsEmbryonic DevelopmentMeristemMicroscopy, ConfocalPlant RootsArabidopsis ProteinsAUX1 protein, Arabidopsis

Identifiers

PMID19952011
PMCPMC2814760
OpenAlexW2101911070

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.