Evidence map›Paper›PMID 19949874›Full record

ArticleMolecular biology reports2010

An alkali-tolerant xylanase produced by the newly isolated alkaliphilic Bacillus pumilus from paper mill effluent.

Jing Wang, Wei-wei Zhang, Jin-ni Liu, Yao-ling Cao, Xiao-ting Bai, Yue-sheng Gong, Pei-lin Cen, Ming-ming Yang

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Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jing WangCollege of Animal Sciences and Technology, Northwest A&F University, 712100, Yangling, People's Republic of China.
Wei-wei Zhang
Jin-ni Liu
Yao-ling Cao
Xiao-ting Bai
Yue-sheng Gong
Pei-lin Cen
Ming-ming Yang

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An alkaline active xylanase, XynBYG, was purified from an alkaliphilic Bacillus pumilus BYG, which was newly isolated from paper mill effluent. It had an optimum pH of 8.0-9.0, and showed good stability after incubated at pH 9.0 for 120 min. The optimum temperature for the activity was 50°C, and the enzyme retained below 55% of its original activity for 30 min at 55°C. The gene coding for XynBYG consists of 687 bp and encodes 229 amino acids. Similarity analysis indicated that XynBYG belong to family 11 glycosyl hydrolases. Site-directed mutagenesis was performed to replace five sites (Tyr/Ser) to Arg/Glu and the results demonstrated that the optimum temperature of the mutant Y7 (S39R-T146E) increased 5°C and the half-life of inactivation (T1/2) at 60 and 65°C was 1 h and 25 min, respectively. Thus, it provides a potential xylanase that can meet the harsh conditions in the industrial applications.

Indexed as

PaperWaste Disposal, FluidAdaptation, PhysiologicalAlkaliesBacillusCloning, MolecularElectrophoresis, Polyacrylamide GelEndo-1,4-beta XylanasesEnzyme StabilityEscherichia coliGene Expression Regulation, BacterialGenes, BacterialHydrogen-Ion ConcentrationIndustrial WasteMutagenesis, Site-DirectedSequence Analysis, DNAAlkaliesEndo-1,4-beta XylanasesIndustrial Waste

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.