Evidence map›Paper›PMID 19949424›Full record

ArticleThe pharmacogenomics journal2010

Role of Esrrg in the fibrate-mediated regulation of lipid metabolism genes in human ApoA-I transgenic mice.

D Sanoudou, A Duka, K Drosatos, K C Hayes, V I Zannis

Open access · hybridAbstract read
In one paragraph

Article in The pharmacogenomics journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  3. eLife · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

D SanoudouMolecular Biology Division, Biomedical Research Foundation of the Academy of Athens.
A Duka
K Drosatos
K C Hayes
V I Zannis
Boston University · USBiomedical Research Foundation of the Academy of Athens · GRBoston Medical Center · USBrandeis University · US

Funding

MOLECULAR AND FUNCTIONAL ANALYSIS OF HUMAN APOA-IR01HL048739 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZANNIS, VASSILIS I · 1994 to 2011
$4.3M
Functions of apoE in cholesterol and triglyceride homeostasisR01HL068216 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ZANNIS, VASSILIS I · 2001 to 2010
$2.9M
NHLBI NIH HHS HL48739NHLBI NIH HHS HL68216NHLBI NIH HHS R01 HL048739NHLBI NIH HHS R01 HL068216
6 · The paper itself

Abstract

We have used a new ApoA-I transgenic mouse model to identify by global gene expression profiling, candidate genes that affect lipid and lipoprotein metabolism in response to fenofibrate treatment. Multilevel bioinformatical analysis and stringent selection criteria (2-fold change, 0% false discovery rate) identified 267 significantly changed genes involved in several molecular pathways. The fenofibrate-treated group did not have significantly altered levels of hepatic human APOA-I mRNA and plasma ApoA-I compared with the control group. However, the treatment increased cholesterol levels to 1.95-fold mainly due to the increase in high-density lipoprotein (HDL) cholesterol. The observed changes in HDL are associated with the upregulation of genes involved in phospholipid biosynthesis and lipid hydrolysis, as well as phospholipid transfer protein. Significant upregulation was observed in genes involved in fatty acid transport and beta-oxidation, but not in those of fatty acid and cholesterol biosynthesis, Krebs cycle and gluconeogenesis. Fenofibrate changed significantly the expression of seven transcription factors. The estrogen receptor-related gamma gene was upregulated 2.36-fold and had a significant positive correlation with genes of lipid and lipoprotein metabolism and mitochondrial functions, indicating an important role of this orphan receptor in mediating the fenofibrate-induced activation of a specific subset of its target genes.

Indexed as

AnimalsApolipoprotein A-ICholesterol, HDLFemaleFenofibrateGene Expression ProfilingGene Expression RegulationHumansLipid MetabolismMetabolic Networks and PathwaysMiceMice, TransgenicProtein Array AnalysisReceptors, EstrogenRNA, MessengerTranscription FactorsApolipoprotein A-ICholesterol, HDLestrogen receptor gammaFenofibrateReceptors, EstrogenRNA, MessengerTranscription Factors

Identifiers

PMID19949424
PMCPMC2875298
OpenAlexW1989883320

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.