Evidence map›Paper›PMID 19948768›Full record

ArticleRNA (New York, N.Y.)2010

Mature and functional viral miRNAs transcribed from novel RNA polymerase III promoters.

Kevin W Diebel, Anna L Smith, Linda F van Dyk

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Evaluation of immune sensor responses to a viral small noncoding RNA.Frontiers in cellular and infection microbiology · 2024
    Article
  5. Review
  6. Viral miRNA regulation of host gene expression.Seminars in cell & developmental biology · 2023
    Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Article
  14. MicroRNA Involvement in Signaling Pathways During Viral Infection.Frontiers in cell and developmental biology · 2020
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kevin W DiebelProgram in Molecular Biology, University of Colorado Denver School of Medicine, Aurora, Colorado, 80045, USA.
Anna L Smith
Linda F van Dyk
University of Colorado Denver · US

Funding

U of Colorado Center for AIDS ResearchP30AI054907 · NIAID · UNIVERSITY OF COLORADO DENVER · PI MAWHINNEY-DELSON, SAMANTHA · 2003 to 2008
$9.6M
In Vivo Analysis of Viral CyclinR01CA103632 · NCI · UNIVERSITY OF COLORADO DENVER · PI VAN DYK, LINDA F. · 2004 to 2008
$1.4M
NCI NIH HHS CA103632NCI NIH HHS R01 CA103632NIAID NIH HHS P30 AI054907
6 · The paper itself

Abstract

Murid herpesvirus 4 (MuHV-4) microRNAs were previously cloned from latently infected tumor cells and predicted to be processed from a series of RNA polymerase III primary transcripts. We detected maturely processed MuHV-4 miRNAs within total RNA from lytically infected cells in vitro and infected tissues ex vivo, using a highly sensitive reverse ligation meditated RT-PCR strategy. We determined that the MuHV-4 microRNAs are biologically active during infection by a luciferase reporter system. We experimentally demonstrated that transcription of the MuHV-4 microRNAs is by RNA polymerase III by alpha-amanitin insensitivity and by specific deletion of the RNA polymerase III type 2-like promoter elements of MuHV-4, resulting in the complete loss of miRNA detection and function. Finally, we demonstrate that these 10 viral miRNAs, each transcribed from highly conserved and novel polymerase III promoter elements, vary markedly in their relative abundance and activity.

Indexed as

Transcription, Genetic3T3 CellsAnimalsBase SequenceCells, CulturedGene DeletionHerpesviridae InfectionsHumansMiceMicroRNAsModels, BiologicalMolecular Sequence DataNucleic Acid ConformationPromoter Regions, GeneticRhadinovirusRNA Polymerase IIIMicroRNAsRNA Polymerase IIIRNA, Viral

Identifiers

PMID19948768
PMCPMC2802027
OpenAlexW2169401299

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.