Evidence map›Paper›PMID 19948482›Full record

ArticleThe Journal of cell biology2009

Mammalian Rif1 contributes to replication stress survival and homology-directed repair.

Sara B C Buonomo, Yipin Wu, David Ferguson, Titia de Lange

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 147 citations in OpenAlex.

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  19. Multi-scale dynamics of heterochromatin repair.Current opinion in genetics & development · 2021
    Review
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31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sara B C BuonomoLaboratory of Cell Biology and Genetics, The Rockefeller University, New York, NY 10065, USA. sara.buonomo@embl.it
Yipin Wu
David Ferguson
Titia de Lange
Rockefeller University · USUniversity of Michigan–Ann Arbor · US

Funding

TELOMERE LENGTH CONTROL BY TRF1 AND TRF2R01CA076027 · NCI · ROCKEFELLER UNIVERSITY · PI DE LANGE, TITIA · 1998 to 2012
$4.3M
NCI NIH HHS R01 CA076027
6 · The paper itself

Abstract

Rif1, originally recognized for its role at telomeres in budding yeast, has been implicated in a wide variety of cellular processes in mammals, including pluripotency of stem cells, response to double-strand breaks, and breast cancer development. As the molecular function of Rif1 is not known, we examined the consequences of Rif1 deficiency in mouse cells. Rif1 deficiency leads to failure in embryonic development, and conditional deletion of Rif1 from mouse embryo fibroblasts affects S-phase progression, rendering cells hypersensitive to replication poisons. Rif1 deficiency does not alter the activation of the DNA replication checkpoint but rather affects the execution of repair. RNA interference to human Rif1 decreases the efficiency of homology-directed repair (HDR), and Rif1 deficiency results in aberrant aggregates of the HDR factor Rad51. Consistent with a role in S-phase progression, Rif1 accumulates at stalled replication forks, preferentially around pericentromeric heterochromatin. Collectively, these findings reveal a function for Rif1 in the repair of stalled forks by facilitating HDR.

Indexed as

DNA RepairDNA ReplicationAnimalsDNA DamageEmbryonic DevelopmentHeterochromatinHumansMiceRad51 RecombinaseRNA InterferenceS PhaseTelomere-Binding ProteinsHeterochromatinRad51 RecombinaseRif1 protein, mouseTelomere-Binding Proteins

Identifiers

PMID19948482
PMCPMC2779251
OpenAlexW2128940137

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.