Evidence map›Paper›PMID 19948351›Full record

ArticleVirology2010

New generic primer system targeting mucosal/genital and cutaneous human papillomaviruses leads to the characterization of HPV 115, a novel Beta-papillomavirus species 3.

Diego Chouhy, Mario Gorosito, Adriana Sánchez, Esteban C Serra, Adriana Bergero, Ramón Fernandez Bussy, Adriana A Giri

Abstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. HPV Infections-Classification, Pathogenesis, and Potential New Therapies.International journal of molecular sciences · 2024
    Review
  3. Article
  4. Article
  5. Soft tissue sarcomas in 2 zoo-housed Alaskan moose.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2022
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Diego ChouhyArea Virología, Facultad de Ciencias Bioquímicas y Farmacéuticas, Universidad Nacional de Rosario, 2000 Rosario, Argentina.
Mario Gorosito
Adriana Sánchez
Esteban C Serra
Adriana Bergero
Ramón Fernandez Bussy
Adriana A Giri

Funding

UZCHS-Promote Excellence in Research and Faculty Enhanced Career Training (PERFECT Program)D43TW010137 · FIC · COLLEGE OF HEALTH SCIS UNIV OF ZIMBABWE · PI CHIPATO, TSUNGAI · 2015 to 2019
$4.1M
Mount Sinai-New York State-Argentina HIV Prevention ProgramD43TW001037 · FIC · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI INDYK, DEBBIE S · 2000 to 2011
$4.1M
FIC NIH HHS D43 TW0010137FIC NIH HHS D43 TW001037FIC NIH HHS D43 TW010137
6 · The paper itself

Abstract

We explored the cutaneotropic HPV genetic diversity in 71 subjects from Argentina. New generic primers (CUT) targeting 88 mucosal/cutaneous HPV were designed and compared to FAP primers. Overall, 69 different HPV types/putative types were identified, being 17 of them novel putative types. Phylogenetic analysis of partial L1 sequences grouped 2 novel putative types in the Beta-PV, 14 in the Gamma-PV and 1 in the Mu-PV genera. CUT primers showed broader capacity than FAP primers in detecting different genera/species and novel putative types (p<0.01). Using overlapping PCR, the full-length genome of a Beta-PV putative type was amplified and cloned. The new virus, designated HPV 115, encodes five early genes and two late genes. Phylogenetic analysis indicated HPV 115 as the most divergent type within the genus Beta-PV species 3. This report is the first providing data on cutaneous HPVs circulating in South America and expands our knowledge of the Papillomaviridae family.

Indexed as

AdultAgedAged, 80 and overArgentinaCapsid ProteinsCluster AnalysisDNA PrimersDNA, ViralFemaleGenetic VariationHumansMaleMiddle AgedMolecular Sequence DataOncogene Proteins, ViralPapillomaviridaeCapsid ProteinsDNA PrimersDNA, ViralHPV L1 protein, Human papillomavirusOncogene Proteins, Viral

Identifiers

PMID19948351
PMCPMC2813930

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.