Evidence map›Paper›PMID 19946875›Full record

ArticleBiotechnology journal2010

Inhibition of 2A-mediated 'cleavage' of certain artificial polyproteins bearing N-terminal signal sequences.

Pablo de Felipe, Garry A Luke, Jeremy D Brown, Martin D Ryan

Open access · bronzeAbstract read
In one paragraph

Article in Biotechnology journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 90 citations in OpenAlex.

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  13. Synthetic polycistronic sequences in eukaryotes.Synthetic and systems biotechnology · 2021
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  17. Circular RNA, the Key for Translation.International journal of molecular sciences · 2020
    Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Pablo de FelipeCentre for Biomolecular Sciences, North Haugh, University of St. Andrews, St. Andrews, Scotland, UK.
Garry A Luke
Jeremy D Brown
Martin D Ryan
University of St Andrews · GBNewcastle University · GB

Funding

Biotechnology and Biological Sciences Research Council BB/E009093/1Medical Research Council G117/395Wellcome Trust
6 · The paper itself

Abstract

Where 2A oligopeptide sequences occur within ORFs, the formation of the glycyl-prolyl peptide bond at the C-terminus of (each) 2A does not occur. This property can be used to concatenate sequences encoding several proteins into a single ORF: each component of such an artificial polyprotein is generated as a discrete translation product. 2A and '2A-like' sequences have become widely utilised in biotechnology and biomedicine. Individual proteins may also be co- and post-translationally targeted to a variety of sub-cellular sites. In the case of polyproteins bearing N-terminal signal sequences we observed, however, that the protein downstream of 2A (no signal) was translocated into the endoplasmic reticulum (ER). We interpreted these data as a form of 'slipstream' translocation: downstream proteins, without signals, were translocated through a translocon pore already formed by the signal sequence at the N-terminus of the polyprotein. Here we show this effect is, in fact, due to inhibition of the 2A reaction (formation of fusion protein) by the C-terminal region (immediately upstream of 2A) of some proteins when translocated into the ER. Solutions to this problem include the use of longer 2As (with a favourable upstream context) or modifying the order of proteins comprising polyproteins.

Indexed as

Protein Modification, TranslationalProtein Sorting SignalsBacterial ProteinsCysteine EndopeptidasesHeLa CellsHumansLuminescent ProteinsModels, BiologicalNuclear Localization SignalsOpen Reading FramesPolyproteinsProtein TransportSequence DeletionBacterial ProteinsCysteine EndopeptidasesLuminescent ProteinsNuclear Localization SignalsPolyproteinsProtein Sorting Signalsyellow fluorescent protein, Bacteria

Identifiers

PMID19946875
PMCPMC2978324
OpenAlexW1980586042

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.